Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score =  130 bits (327), Expect = 4e-35
 Identities = 82/297 (27%), Positives = 156/297 (52%), Gaps = 16/297 (5%)

Query: 1   VLWQATANGLLLGGLYGIATIGFSMVWGVMGVINLAHTGFIMLGAY---ITYGLFRFAGL 57
           +  Q   NGL LG +YG+  IG++MV+G++G+IN AH    M+ AY   I+  L  + G+
Sbjct: 4   IFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGV 63

Query: 58  DP-----IASIPVSMIAMFALGYALQVLVLNRIIRTSLLLSLVVTFGIELVMVDAVSIAF 112
           +      + ++  +++     G+ ++ +    +  ++ L  L+   GI L++ +   I+ 
Sbjct: 64  ESFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQ 123

Query: 113 TSDVRSVNSSY-AASSIEVFGILVPV----VRLIAAGFSVTLGIAFFAFLRFTRAGQMIL 167
            +  + V +    A  +EV    V +    + ++ A F V +G+  +  +++T+ G+M  
Sbjct: 124 GARQQGVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAF-VGMGLLTYV-IKYTKLGRMCR 181

Query: 168 ATALDREVSSLMGINPERIYALTAGAGAALAGATGSLASMLFPVMPGM-GVTFLSAVFVI 226
           AT  DR+++S++GIN +R+ +     GA +A   G L +M +       G       F  
Sbjct: 182 ATQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFTA 241

Query: 227 TVLGGIGSVEGCIVAGFIYGLVQAWAGYFLGANYQEIVGFGLFLLVLALRPQGLFGR 283
            VLGGIGS+ G ++ G I G+ ++     + ++Y+++  F L +++L  RPQGL GR
Sbjct: 242 AVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGR 298