Pairwise Alignments

Query, 326 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  130 bits (328), Expect = 4e-35
 Identities = 98/318 (30%), Positives = 155/318 (48%), Gaps = 35/318 (11%)

Query: 26  VVLALAPLALNNYWLRVLTTVFMYATVTQGLNVIVGLTGYHAFGNAVFFGFGAYACGVAM 85
           V+  + P+  N Y L V+    +Y  +  GLN++VGL G    G   F+  GAY   +  
Sbjct: 104 VIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGY 163

Query: 86  T-LGAPFPVALIAAVAFSALVAGIVGWPILRLRGHYFAIATVALNLAAIQLVIQVG-GVT 143
             LG  F   L  A   +AL   I+G+P+LR+ G Y AI T+      I+LV+      T
Sbjct: 164 QYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFG-EIIRLVLNNWLSFT 222

Query: 144 GGAEGLPLPLS------------------------DLPPGPLYRAIYLVMLAGMVVSTLL 179
           GG  G+P+P                          D  P   +  IY+V+   +V++ L 
Sbjct: 223 GGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFL-VVLAVLY 281

Query: 180 VAFILTR-PFGYALRAIRDGERAAGVMGIDTTATKVAAWALSAGITGFAGGVWAYWITFI 238
           +   LTR P G A  A+R+ E A   MG++    K++A+ + A   G AG  +A +  F+
Sbjct: 282 IKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFV 341

Query: 239 EPAS--AFDPAIGVKAYMMLILGGMGTVIGPVLGAFVLEFLSTLVWGGFLQAHQIVFGVL 296
            P+S   F+ A+      +++LGGMG+ +G V+ AFVL     L+   F +   ++FGVL
Sbjct: 342 NPSSFTFFESAL---ILAIVVLGGMGSTVGVVIAAFVLTVAPELL-RSFSEYRVLLFGVL 397

Query: 297 IVVICLVAPNGMLVAGRS 314
           +VV+ +  P G++   R+
Sbjct: 398 MVVMMIWRPRGLIRISRT 415