Pairwise Alignments

Query, 326 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

 Score =  123 bits (309), Expect = 7e-33
 Identities = 100/318 (31%), Positives = 155/318 (48%), Gaps = 35/318 (11%)

Query: 26  VVLALAPLALNNYWLRVLTTVFMYATVTQGLNVIVGLTGYHAFGNAVFFGFGAYACGVAM 85
           V+  + P+  N Y L V+    +Y  +  GLN++VGL G    G   F+  GAY   +  
Sbjct: 114 VIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGY 173

Query: 86  T-LGAPFPVALIAAVAFSALVAGIVGWPILRLRGHYFAIATVALNLAAIQLVIQVG-GVT 143
             LG  F   L  A   +AL   I+G+P+LR+ G Y AI T+      I+LV+      T
Sbjct: 174 QYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFG-EIIRLVLNNWLSFT 232

Query: 144 GGAEGLPLPL--------------SDLPP----GPLYRA------IYLVMLAGMVVSTLL 179
           GG  G+P P                 +P     G  Y A      IY V+   +V++ L 
Sbjct: 233 GGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFM-VVLAVLY 291

Query: 180 VAFILTR-PFGYALRAIRDGERAAGVMGIDTTATKVAAWALSAGITGFAGGVWAYWITFI 238
           +   LTR P G A  A+R+ E A   MG++    K++A+ L A   G AG  +A +  F+
Sbjct: 292 IKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATYQGFV 351

Query: 239 EPAS--AFDPAIGVKAYMMLILGGMGTVIGPVLGAFVLEFLSTLVWGGFLQAHQIVFGVL 296
            P+S   F+ A+      +++LGGMG+ +G V+ AFVL     L+   F +   ++FGVL
Sbjct: 352 NPSSFTFFESAL---ILAIVVLGGMGSTVGVVIAAFVLTVAPELL-RSFSEYRVLLFGVL 407

Query: 297 IVVICLVAPNGMLVAGRS 314
           +V++ +  P G++   R+
Sbjct: 408 MVLMMIWRPRGLIRISRT 425