Pairwise Alignments

Query, 326 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  119 bits (299), Expect = 8e-32
 Identities = 91/298 (30%), Positives = 146/298 (48%), Gaps = 23/298 (7%)

Query: 26  VVLALAPLALNNYWLRVLTTVFMYATVTQGLNVIVGLTGYHAFGNAVFFGFGAYACGVAM 85
           VV +L  L L      + T + ++A      N+++G TG  +FG  +FFG GAY   + M
Sbjct: 21  VVASLVALPLLLPSATLATEILIFAMAALACNLLLGYTGLLSFGQGIFFGVGAYGAALLM 80

Query: 86  T-LGAPFPVALIAAVAFSALVAGIVGWPILRLRGHYFAIATVALNLAAIQLVIQVGGVTG 144
             L      AL+ A  F A +A +VG   +R  G YF + T+A +  A  L   + G TG
Sbjct: 81  IHLQWGMFAALLGAAVFGAFLALLVGALAIRRTGIYFVMLTLAFSQMAYFLAYTLSGWTG 140

Query: 145 GAEGL---PLP--------LSDLPPGPLYRAIYLVMLAGMVVSTLLVAFILTRPFGYALR 193
           G  GL   P P        L DL   P +  +++ +L  ++ +  L   ++  PFG  L 
Sbjct: 141 GDNGLLDVPRPNIEIAGHVLVDLAD-PRHFYVFVAVLFLLIFAAALR--VIRSPFGSTLL 197

Query: 194 AIRDGERAAGVMGIDTTATKVAAWALSAGITGFAGGVWAYWITFIEPASAFDPAIGVKAY 253
           AIR+ E  A  +G DT   K+  + LS  ITG AG ++A  + F  P S  D  +     
Sbjct: 198 AIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHF-APLSNIDLMMSENIL 256

Query: 254 MMLILGGMGTVIGPVLGAFVLEFLSTL---VWGGFLQAHQIVFGVLIVVICLVAPNGM 308
           +M I+GG G++ G +LGA  +  L  +   +W  +L    ++ GV+++++ +    G+
Sbjct: 257 IMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPRWL----MLLGVILILVVVFMRGGL 310