Pairwise Alignments

Query, 258 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

Subject, 277 a.a., putative Branched-chain amino acid ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  176 bits (446), Expect = 5e-49
 Identities = 104/262 (39%), Positives = 151/262 (57%), Gaps = 23/262 (8%)

Query: 1   MALLEANDLEIRFGGVKALAGVSFRVEEGEVFGVIGPNGAGKTTLLNAISAVYKLNGGSI 60
           + LLE   + + F GVKA++ + F V EGE+  +IGPNGAGK++LLN I+ VY+   G I
Sbjct: 4   LPLLELEGISLSFKGVKAISDIGFSVAEGEICALIGPNGAGKSSLLNIINGVYRAQQGRI 63

Query: 61  RFAGEDVTGLPPHRLSRLGIARTFQIVQPFKAMSVRENVAIGAMFGHARLRTRDAWL--- 117
           RFAG+    + PH  +R GIARTFQ +  FK MSV +NV  G       L+ R +WL   
Sbjct: 64  RFAGQQRRVMHPHAAARDGIARTFQNIALFKGMSVLDNVLTG-----RNLKRRSSWLEQA 118

Query: 118 --------------AAADAALERTGLAPKAAFMPPQLTLADRKRLEVARALAMGPRIILF 163
                         AAA+  +E   + P    +   L    +KR+E+ARALA  PR++L 
Sbjct: 119 LRIGRAPGEDDRQRAAAERVIEFLRIQPWRDEIVGTLPYGLQKRIELARALAAEPRLLLL 178

Query: 164 DEVMAGLNHTEIERMIDLVKSL-KQAGLTVVVIEHVMKAVLALCDRIMVLNFGAKLAEGV 222
           DE MAG+N  E   M   +  + ++ G+TVV+IEH +  V+ +   ++VL++G K+ +G 
Sbjct: 179 DEPMAGMNAEEKREMSRFIVEINREFGMTVVLIEHDIGVVMGISHHVVVLDYGRKIGDGS 238

Query: 223 PDDVVSDPKVVEAYLGQRFAKA 244
           P+ V  +P V+ AYLG R A A
Sbjct: 239 PEQVRRNPDVIAAYLGVRPAAA 260