Pairwise Alignments

Query, 348 a.a., putative protein from Xanthobacter sp. DMC5

Subject, 350 a.a., ABC transporter spermidine/putrescine-binding protein from Variovorax sp. SCN45

 Score =  105 bits (262), Expect = 2e-27
 Identities = 103/355 (29%), Positives = 158/355 (44%), Gaps = 19/355 (5%)

Query: 1   MNAAHKFGTLCLLAAGLMA--GPAAAETNLTVMAYSGLFQER-YTKAVLEPFMKAHPDIK 57
           M+   K  T  LL A L+A  G A A+T    +  +G   E+ YT+ V   F KA+   K
Sbjct: 1   MSRTAKSPTSVLLLAALLAAAGTAGAQTKTIYIGMNGGTMEKAYTQYVFPAFEKAY-GAK 59

Query: 58  VTFFPLPSSAAMLGNLRAQKAAPQADVVIMDVSVSKAGTDEGLFTKIDETNIPNVKDLYP 117
           V   P  +S+ +L   +A K  PQ  V+ +D  V       GL  K   +   ++ ++YP
Sbjct: 60  VVVVP-GTSSDILAKAQANKDKPQMHVMFLDDGVMVRAIGMGLCQKQKPSQ--SLSEIYP 116

Query: 118 NARIPSVAGVGVTFDNLVLLYNAEQVKEA----PKSWMEMAKAPYKGKVVIPGVPDIQ-G 172
            AR       GV+     L YNA+  KE     P SWM++A   YKGKVV   +     G
Sbjct: 117 AARFKDDMASGVSLGMTGLAYNAKMFKEKGWAPPTSWMDLADPKYKGKVVFQSMSSSSFG 176

Query: 173 LGLVLILNKANGGTDYLASVDKGLAA-VAEIAPNVQTWEPKPEVYAPII-TGQAALGVGY 230
           L   L+ N+  GG D   +V+ G  A    I PNV  + P     + ++ TG+AA+    
Sbjct: 177 LHGFLMFNRIQGGND--RNVEPGFKAWPTTIGPNVLEYIPSSAKLSEMVQTGEAAI-FPL 233

Query: 231 NARAQVNSEQSGGKIKATIPQEGTIFQINTINLVAGAPAAEAAKTFVNYALSPEAQKSFT 290
              A    +  G  ++   P+EG +  +    ++A     E ++    + LSP AQ +  
Sbjct: 234 TPTAVAALKTKGIPVEYAPPKEGAVVLMVGQCVIANNSEPELSQKLAEFLLSPVAQANVL 293

Query: 291 ETMFYAPTNSK--AEITGAALDRTAVKNLDKVMAVDWIALAQVRDKIAEQWRRRV 343
           +     PTN K  AE  GAA      K +   + +DW ++   R     +W + +
Sbjct: 294 QYGAQIPTNPKTPAEGEGAAQVADINKWMKTAVTIDWESINANRPAWNARWNKTI 348