Pairwise Alignments

Query, 348 a.a., putative protein from Xanthobacter sp. DMC5

Subject, 348 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotD from Escherichia coli ECRC62

 Score = 75.1 bits (183), Expect = 3e-18
 Identities = 89/354 (25%), Positives = 148/354 (41%), Gaps = 39/354 (11%)

Query: 12  LLAAGLMA---GPAAAETNLTVMAYSGLFQERYTKAVLEPFMKAHPDIKVTFFPLPSSAA 68
           LLAAG +A     A A+ N T+  Y+  + E     +LE F K    IKV +    S+  
Sbjct: 8   LLAAGALALGMSAAHADDNNTLYFYN--WTEYVPPGLLEQFTK-ETGIKVIYSTYESNET 64

Query: 69  MLGNLRAQKAAPQADVVIMDVSVSKAGTDEGLFTKIDETNIPNVKDLYPNA--------- 119
           M   L+  K      VV     V K    EG+  KID++ + N  +L P+          
Sbjct: 65  MYAKLKTYKDGAYDLVVPSTYYVDKM-RKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNN 123

Query: 120 --RIPSVAG---VGVTFDNLVLLYNAEQVKEAPKSWMEMAKAPYKGKVVIPGVPDIQGLG 174
              IP + G   +GV  D +          ++  SW ++ K  YKG +++    D     
Sbjct: 124 DYSIPYIWGATAIGVNGDAVD--------PKSVTSWADLWKPEYKGSLLLT---DDAREV 172

Query: 175 LVLILNKA--NGGTDYLASVDKGLAAVAEIAPNVQTWEPKPEVYAPIITGQAALGVGYNA 232
             + L K   +G T     ++     + ++ PNV  +        P + G+  LG+ +N 
Sbjct: 173 FQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPAN-PYMEGEVNLGMIWNG 231

Query: 233 RAQVNSEQSGGKIKATIPQEGTIFQINTINLVAGAPAAEAAKTFVNYALSPEAQKSFTET 292
            A V + Q+G  I    P+EG IF ++++ + A A   E A   +N+ L P+  K   ET
Sbjct: 232 SAFV-ARQAGTPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAET 290

Query: 293 MFYAPTNSKAE---ITGAALDRTAVKNLDKVMAVDWIALAQVRDKIAEQWRRRV 343
           + Y   N  A        A D+T   + + +   +W         I E++ +++
Sbjct: 291 IGYPTPNLAARKLLSPEVANDKTLYPDAETIKNGEWQNDVGAASSIYEEYYQKL 344