Pairwise Alignments

Query, 404 a.a., Leucine-specific-binding protein from Xanthobacter sp. DMC5

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 94/377 (24%), Positives = 159/377 (42%), Gaps = 28/377 (7%)

Query: 9   KSVAALGLATLFGAGTAAAQEKIKIGAAVSLTGNFAREGHLLKNGYAYWEKLVNDAGGIK 68
           K   AL +AT  G  ++  Q  +KIG A  +TG  A  G     G       +N AGG+ 
Sbjct: 8   KGFLALAVATALGV-SSYVQADVKIGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGVN 66

Query: 69  VGDKKMPVEVIYYDDESKPQTSARLTEKLITEDGVGFILGPYSSGIATATAAISEKYKVI 128
            G+K   + ++  DD  +P+ +  +  +L+ +D V  ++G + S      + + ++  VI
Sbjct: 67  -GEK---IVLVKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGVI 122

Query: 129 TMTPMATADSLYQRGYKYIF--CPAPLASTTL--DPMLALLKTVKDPPKTIAIAGPDDLF 184
            +TP +T   + +RG   +F  C        +  D ++ +LK      K +A+    D +
Sbjct: 123 AITPGSTNPQVTERGLSAMFRMCGRDDQQGIVAGDYIVDVLK-----GKKVAVLHDKDTY 177

Query: 185 PNVFAGAAQKKAEAEGLKVVYSTKYPKGSADLSSVATALKESNPDVLILTGYVQDSILLI 244
               A A + + E  G+K V      +G  D S+V T ++ +  DV+   G   ++  L+
Sbjct: 178 GQGLADATKAQLEKRGVKPVLYEGLTRGEKDFSAVVTKIRSTGADVVYFGGLHPEAGPLV 237

Query: 245 KTLQTLKVNPKLIGFAFAVGI-PDFLNALGPAAEDLFGVQIW---DPALTYKGPVVADSA 300
           + L+  +   K + F    GI  D L +    A+ + GV +    DP L      + DS 
Sbjct: 238 RQLR--EQGLKDVKFMSDDGIVTDELVSTAGGAQYVDGVYMTFGADPRL------LPDSK 289

Query: 301 TYVETFKKQFGGEVPTYITAAGTAGALSLQLAIEKAGSIDPVKVREAMLQLDTDTFFGPV 360
             VE F+K   G  P   T    A   +L  A   A S       + +      T  G  
Sbjct: 290 AVVEEFRK--AGTEPEGYTLYAYASLQALAAAFNGAKSNKGEDAAKWLKANPVQTVMGEK 347

Query: 361 KYNDAGVDVKASAVVAQ 377
           K++  G    +  VV Q
Sbjct: 348 KWDSKGDLTVSDYVVYQ 364