Pairwise Alignments

Query, 480 a.a., Riboflavin transporter RibZ from Xanthobacter sp. DMC5

Subject, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

 Score =  154 bits (390), Expect = 5e-42
 Identities = 116/422 (27%), Positives = 195/422 (46%), Gaps = 13/422 (3%)

Query: 13  HAAAAHRPIHSGMVLTGLSLAILLSQLGTNIINVALPTLVKSLGVDFGAVQWVVVSYLLV 72
           +AAA   P    +   GLSLA  +  L T I NVALPT+  +LGV +    WV+ S+ + 
Sbjct: 4   NAAAQFTPPSLLLTTIGLSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVS 63

Query: 73  VTALIVGVGRFGDQLGKKRLYLWGLAVFMAASVLCALSTSLPLLIAGRAGQGLGGAILMA 132
               +   G    + G+ +L++W   +F+ AS LC ++ S+P L+  R  QG+    L  
Sbjct: 64  NAIALPLTGWLSRRFGEVKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYP 123

Query: 133 LSFAFVGEVFPKERTGFAMGVLSTMVSFGIALGPSLGSLALAAFGWQAVFWVNLPFGLLA 192
           ++   +  V+P  + G A+ +L+ +       GP LG     ++ W  +F++N+P GL A
Sbjct: 124 MTQTLLIAVYPPAKRGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFA 183

Query: 193 FLLVSRYLPNAVDAPKHPVPAAR--FDWLGTILLALTLGAYALAMTFAGK-QGFDAPLVL 249
             +V + +         PV  +R   D++G + L + +GA  + +        F++  ++
Sbjct: 184 AAVVRQQMRT------RPVVTSRQPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFII 237

Query: 250 QLGLGALVGLALFLAVQVKARAPLLKLSMFGNVLLSTSMVMSVLVYAVMMATLVLGPFFL 309
              L ++V LA+F+  ++  R P++ L +F +       ++ V  YA      ++ P +L
Sbjct: 238 VGSLISVVFLAVFVIWELTDRHPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWL 297

Query: 310 SKALGLDTRMVGLVMTVGPLAAAIMGVPAGTLADRIGARLAMVIGLALFTIGAFAMSWVS 369
              +G      GL +    L   IM    G  A R   R  ++ GLA   IG        
Sbjct: 298 QTQMGYTATWAGLAVAPIGLLPVIMSPFVGKYAHRFDLR--VLAGLAFLAIGTSCYMRAG 355

Query: 370 RDGGVAIYIVAI--LFISVGLAFFQTPNNTAVMTDARPEQRGLVSGLLALARNLGLITGA 427
               V    VA+  LF+ +G+A F  P  + +++D  P Q    SGL    R LG    A
Sbjct: 356 FTSEVDFQHVALVQLFMGIGVALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAA 415

Query: 428 SL 429
           SL
Sbjct: 416 SL 417



 Score = 25.0 bits (53), Expect = 0.006
 Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 10/160 (6%)

Query: 272 PLLKLSMFGNVLLSTSMVMSVLVYAVMMATLVLGPFFLSKALGLDTRMVGLVMTVGPLAA 331
           P L L+  G  L +   V+   +  V + T+       S  LG+       V+T   ++ 
Sbjct: 12  PSLLLTTIGLSLATFMQVLDTTIANVALPTI-------SGNLGVSYEQGTWVITSFAVSN 64

Query: 332 AIMGVPAGTLADRIGARLAMVIGLALFTIGAFAMSWVSRDGGVAIYIVAILFISVGLAFF 391
           AI     G L+ R G     +    LF + +F +  +++     +    +  +  G  + 
Sbjct: 65  AIALPLTGWLSRRFGEVKLFIWATLLFVLASF-LCGIAQSMPELVGFRVLQGVVAGPLYP 123

Query: 392 QTPNNTAVMTDARPEQRGLVSGLLALARNLGLITGASLMG 431
            T   T ++    P +RG+   LLA+   +  I G  L G
Sbjct: 124 MT--QTLLIAVYPPAKRGMALALLAMVTVVAPIAGPILGG 161