Pairwise Alignments

Query, 260 a.a., Bicarbonate transport system permease protein CmpB from Xanthobacter sp. DMC5

Subject, 251 a.a., putative Sulfonate ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  132 bits (331), Expect = 9e-36
 Identities = 80/242 (33%), Positives = 126/242 (52%), Gaps = 6/242 (2%)

Query: 13  LGLAGLVGFFGLW-ALVAASGLV-GKAFLPGPLEVAERLVTLLHTSFAGGTLPQHLASSL 70
           LGL GL+    LW A VA  G   G +    P      LV LL      G +  H+  SL
Sbjct: 10  LGLVGLLALLLLWWAGVALFGQADGLSARFSPAATLASLVELL----GQGEVYGHIWVSL 65

Query: 71  QRFSAGYLLAAAVGVPLGLLMGRFRLLDDIVSPLFDALRFIAPIAWVPFAALWFGTGFGG 130
           +R   G LLA  +GVPLGLL+G +R L+ + +P F  LR I+P++W+P   +  G G   
Sbjct: 66  KRILIGLLLALLMGVPLGLLVGSYRHLEAVTTPAFQFLRMISPLSWMPVVVMLMGVGDQP 125

Query: 131 PVLIIFSGAFPPCLLNAYRGARQVDPRYIEAAEMLGTPTHRLILEVLLPAATPSIVAGLR 190
              ++   A  P LLN   G RQ+DPR+++ +  L       + +V++P     ++ G+R
Sbjct: 126 IYFLLAFAALWPILLNTAAGVRQLDPRWLQLSRSLSATRWETLCKVIVPGVIGHVLTGVR 185

Query: 191 IGAGLGWQSLVGAELIVASTGVGYMMVQAQSGVATATVMVGMAAIGLVGVLIDIALRALE 250
           +  G+ W  LV  E++  S G+GY ++  +  +A + +M  +  IG++G ++D   R L 
Sbjct: 186 LAIGILWIVLVPCEMLGVSAGLGYFILDTRDRLAYSELMAMVLLIGVLGFVLDALARGLH 245

Query: 251 AR 252
            R
Sbjct: 246 RR 247