Pairwise Alignments

Query, 260 a.a., Bicarbonate transport system permease protein CmpB from Xanthobacter sp. DMC5

Subject, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  147 bits (372), Expect = 2e-40
 Identities = 93/236 (39%), Positives = 126/236 (53%), Gaps = 8/236 (3%)

Query: 9   RRMVLGLAGLVGFFGLWALVAAS----GLVGKAFLPGPLEVAERLVTLLHTSFAGGTLPQ 64
           +R  + LA L+     W + A      GL+   ++P P  V +    LL +S    TL  
Sbjct: 6   KRWPVRLASLLACLLFWQVAANVKMDLGLLTFTYVPTPKAVLDAAWQLLTSS----TLLA 61

Query: 65  HLASSLQRFSAGYLLAAAVGVPLGLLMGRFRLLDDIVSPLFDALRFIAPIAWVPFAALWF 124
           HL SSL R  AGY  AA VGV LGLL+GR +  +D + P  + LR I  +AW+P A L F
Sbjct: 62  HLGSSLARVFAGYATAALVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVAWIPLAILMF 121

Query: 125 GTGFGGPVLIIFSGAFPPCLLNAYRGARQVDPRYIEAAEMLGTPTHRLILEVLLPAATPS 184
            +     V I F+GA  P LLN   G   VDPR + +A  LG     ++ EV+LP A PS
Sbjct: 122 PSSELSMVFITFTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPGALPS 181

Query: 185 IVAGLRIGAGLGWQSLVGAELIVASTGVGYMMVQAQSGVATATVMVGMAAIGLVGV 240
           IV GL IG G  W  LV AE+I    G+GY   ++ +      ++VGM  IG++G+
Sbjct: 182 IVTGLAIGMGTSWFCLVTAEMISGQFGIGYYTWESYTLQNYPDIVVGMLLIGVLGM 237