Pairwise Alignments

Query, 472 a.a., Cytochrome bd-II ubiquinol oxidase subunit 1 from Xanthobacter sp. DMC5

Subject, 464 a.a., Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) from Sphingobium sp. HT1-2

 Score =  414 bits (1063), Expect = e-120
 Identities = 210/446 (47%), Positives = 287/446 (64%), Gaps = 2/446 (0%)

Query: 1   MDALALSRLQFAFTVGFHILWPTLTIGTAWFVTLLSFLWWRTGKTVYRDLMRFWMRLFAL 60
           MDA+ L+R QFAFTV FH L+P  +IG A ++ +L  LW +TGK VY +L R+W+++FA+
Sbjct: 1   MDAIILARAQFAFTVSFHFLFPAFSIGLASYLAVLEALWLKTGKGVYANLFRYWLKIFAV 60

Query: 61  VFGMGVVSGIVLSYEIGTNWAGFSRSVANVLGPLLAYETMTAFFLEAGFIGIMLFGEARV 120
           VF MGVVSGIV+SY+ GTNW+ FS     V+GPL+AYE +TAFFLEAGF+G+MLFG  +V
Sbjct: 61  VFAMGVVSGIVMSYQFGTNWSVFSDKAGPVIGPLMAYEVLTAFFLEAGFLGVMLFGINKV 120

Query: 121 SKATHFFACLMVAGGALISTTWIIASNSWMQTPAGAVADASGIY-HVVDWWQVIFTASFP 179
            +  HF A L VA G  IS  WI++ NSWMQTP G    A+G +     W  +IF  SFP
Sbjct: 121 GRKLHFVATLAVALGTFISAFWILSVNSWMQTPVGYEVGANGQFLPGPSWLTIIFNPSFP 180

Query: 180 YRLAHMVCASFLTCAFVIAGVSAFHMWRGQHVTASRTAFSMALWLALVLAPLQIFIGDLH 239
           YRL H V A++LT AF++  V  +H+ + +    +R  FSMA+W+A ++AP+QIF GD+H
Sbjct: 181 YRLFHTVLAAYLTTAFIVGAVGGWHLLKDRTNPGARKMFSMAMWMAALVAPIQIFAGDMH 240

Query: 240 GRNTLVHQPTKLAAMEGLWDT-TRGPAMTVIAWPDMAAQKNLYAVEIPHLASLYLTHSWN 298
           G NTL HQP K+ AMEG + +   G  + +   P+ A Q+  Y VEIP  +SL L H  +
Sbjct: 241 GLNTLKHQPVKVMAMEGHFQSHPHGAPLILFGIPNSAEQRVDYVVEIPKASSLILKHQLD 300

Query: 299 GEVEGLKAVPPADQPNVPIVFFAFRIMAGIGMVLLATAVTGLVLRLRGRLYNARWFQYLA 358
             ++GL  VP AD+P V IVF+AFR+M GIG  +L   +  L+ R R  LY+       A
Sbjct: 301 APLKGLDTVPQADRPPVGIVFWAFRVMVGIGFAMLGIGLLSLIARWRKALYDWSLLHRFA 360

Query: 359 MATTPLGLVAVLAGWTVTEAGRQPWIIYSVLRTADAVAPVTAGAVTTSLIIFFAVYNLLL 418
           +   P GL+AVLAGW VTE GRQP+ IY +LRT  + +P+ A AV +SL+ F  VY  + 
Sbjct: 361 VLMGPSGLIAVLAGWIVTEVGRQPFTIYGLLRTTQSASPLDAPAVASSLLAFVIVYFTVF 420

Query: 419 LAFLWFAGRVAFKGPTDTKPQLAERP 444
              +W+   +  K P   +  L + P
Sbjct: 421 GMGIWYLLHLMKKPPEAHETPLGDAP 446