Pairwise Alignments

Query, 283 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 495 a.a., putative Urea ABC transporter from Pseudomonas putida KT2440

 Score =  146 bits (369), Expect = 8e-40
 Identities = 97/286 (33%), Positives = 150/286 (52%), Gaps = 19/286 (6%)

Query: 9   NSFAFGAILFLLAVGFSLIFGLMRVANLAHGALFMLGGYIATSAMGL--GFA-GAV---- 61
           +  + G++L L A+G ++ FGL+ V N+AHG + MLG Y       L   FA GA+    
Sbjct: 205 SGLSLGSVLLLAALGLAITFGLLGVINMAHGEMLMLGAYSTYMVQVLLQRFAPGAIEFYP 264

Query: 62  -LAAGAACAVFGGI---LERTLIRRLAGRELAQVLGTLGLAFIIADQCLLVWSGDPIAQP 117
            +A   A AV  G+   LERT+IR L GR L  +L T G++ I+     L++    +   
Sbjct: 265 LIALPVAFAVSAGVGMALERTVIRHLYGRPLETLLATWGISLILIQAIRLLFGAQNVEVS 324

Query: 118 APEALRGAVGF-GGIVFPAYRLALVALALVAFVGIWALVERTTLGARIRAAVDDREMARA 176
            P  L G +     +V P  RL ++  AL   +  W L+ RT LG  +RA   +R MA  
Sbjct: 325 NPAWLSGGIQLLPNLVLPYNRLVIIGFALAVVLLTWLLLNRTRLGLNVRAVTQNRNMAAC 384

Query: 177 MGIPVSRLFTTVFCLGAGLAGIGGALAAPIMSVYPGLDSEMLPLALLVVILGGIGSLTGA 236
            G+   R+    F LG+G+AG+GG   + + +V P L    +  + LVV+LGG+G L G+
Sbjct: 385 CGVSTGRVDMLAFGLGSGIAGLGGVALSQVGNVGPDLGQSYIIDSFLVVVLGGVGQLAGS 444

Query: 237 LAGSLVIGLVYTFGQMLLPDLAYV---ILFLPMVVV-LAVRPQGFF 278
           L  +  +G+     ++L P +  V   IL L ++++ +  RPQG F
Sbjct: 445 LWAAFGLGIA---NKLLEPQIGAVLGKILILALIILFIQKRPQGLF 487