Pairwise Alignments

Query, 353 a.a., HTH-type transcriptional regulator GntR from Xanthobacter sp. DMC5

Subject, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

 Score =  167 bits (422), Expect = 5e-46
 Identities = 108/313 (34%), Positives = 158/313 (50%), Gaps = 7/313 (2%)

Query: 4   IVTIRTVAERAGCSIATVSRVINRSAPTSAEVEARVRAAIDELGFRPSEIGRALKTLKTR 63
           + TI+ VA  AG S  TVS V+N++ P S +V  +V AAI EL + PS + R+LK   T 
Sbjct: 1   MATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTA 60

Query: 64  TVGVLIPSLTNPVFAASVAGMQAAARERRHTLLLTATDYDPAAEAELVETLVAQNVAGLV 123
           T+G+L+P+  NP FA    G++ A     + ++L  +D +P  +   +  L+ + + GLV
Sbjct: 61  TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV 120

Query: 124 LTVACASHNATLDLLEAENIPFVLVHNEPEGDARAAVCVDNAAATSALTEAMIAAGHRNI 183
           +  +    +  L  L +   P V+V  E EG     V +D+       T  ++  GHR++
Sbjct: 121 V-ASVGQDDDLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDV 179

Query: 184 AYLAGRFATSDRSLRRYEGYRAAMEKAG--LHAAAPLELDYLGDAPSHAAALAGLFGGIS 241
           AY+ G   T    L R  G+R AM +AG  +  +  L  D+      HAAA   L G   
Sbjct: 180 AYIGGPAETGVTQL-RLSGFRRAMAEAGAPVPGSRVLHCDFTSPG-GHAAAAQVLEG--K 235

Query: 242 APTAALCSNDLLALSVTGALRNLGIHVPDDVSVAGFDGIALGRAMSPSLATVDTPTRRMG 301
            P+A    ND++   V  A     I VP ++SV GFD I L R + PSL TV    R +G
Sbjct: 236 RPSAIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELG 295

Query: 302 EQAVELLFEMIET 314
           E A  LL   I T
Sbjct: 296 ESAASLLLTRIAT 308