Pairwise Alignments

Query, 291 a.a., Nitrate import ATP-binding protein NrtD from Xanthobacter sp. DMC5

Subject, 273 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  218 bits (555), Expect = 1e-61
 Identities = 117/264 (44%), Positives = 163/264 (61%), Gaps = 6/264 (2%)

Query: 4   PATAPARTGLIEVSDFNLAYDTIDGAVIAVSDADLVVNPGEFVSIIGPSGCGKSTFLNAV 63
           P T      ++ + D  +A+    G+ +AV + +L V  GEF+SI+GP+GCGKST LNA+
Sbjct: 10  PVTELKPQPMVAIDDVTMAF----GSFVAVQNVNLRVGDGEFLSIVGPTGCGKSTILNAI 65

Query: 64  AGFLKPTSGTVTVDGEAVKGPSADRGMVFQQYSLFPWKTVRENVEFGLKMRGMGKSERAV 123
           AG LKP  G V++DG AV+G     G +FQQ +L PWKT  +NVE GL  RG+ + ER  
Sbjct: 66  AGLLKPAQGKVSIDGTAVQGVQNTIGYLFQQDALLPWKTAFQNVELGLMFRGVAEDERRA 125

Query: 124 AARTLLGLAGLSAFEDHYPDRLSGGMKQRVGIVRALATGPKVLLLDEPFGALDAQTRVIM 183
                L   GL  F D +P +LSGG ++RV + +AL T PKV+L+DEPF ALD  TR +M
Sbjct: 126 KVTAWLEKVGLKGFGDRFPHQLSGGQRKRVQMAQALITEPKVILMDEPFSALDIHTRHLM 185

Query: 184 QQILTNLWQRLGISVLFVTHDIDEAIFLSDRIYVMTARP-GTIKAEVTVPLPRPRDAA-L 241
           Q  L  LWQ    +V+ +THD++EAI L DR+ V+ A P   +     V L RPR+ A +
Sbjct: 186 QNELLRLWQEDRRAVVMITHDLEEAIALGDRVVVLAAGPKSRVIESFPVDLERPRNVAEI 245

Query: 242 QLSPEFVQLRADLGALIREESLKA 265
           +L P+F+ L  D+ A +R E  K+
Sbjct: 246 KLDPKFMTLYRDIWASLRGEVEKS 269