Pairwise Alignments

Query, 288 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 288 a.a., putative permease from Pseudomonas putida KT2440

 Score =  367 bits (943), Expect = e-106
 Identities = 184/288 (63%), Positives = 217/288 (75%), Gaps = 2/288 (0%)

Query: 1   MERKAAGWGSGFLGVVIFSGSLPATRLAVVDFSPLFLTSARAVIAAIIGGVFLAAHRQVR 60
           ME+ A GW +GF+GV IF+GSLPATR+AV DF P FLT ARA IAA++G +FL   RQ R
Sbjct: 1   MEKSATGWINGFIGVAIFAGSLPATRVAVADFEPTFLTCARATIAAMLGALFLIVLRQPR 60

Query: 61  PAADDLLSLAIVAIGVVVGFPLLTGLALQHITAAHSIVFIGLLPLATAIFGVVRGGERPK 120
           P   DL  LA+ A+GVV+GFPLLT  ALQHI++AHSIVF+GLLPL TA F V+RGGERP+
Sbjct: 61  PKRRDLSPLAVTALGVVIGFPLLTAFALQHISSAHSIVFVGLLPLCTAGFAVLRGGERPR 120

Query: 121 PAFWLFSCVGAATVAGFALSRSADGSLSGDMLMIGAVVLCGLGYAEGATLSRRLGGWQVI 180
           P FWLFS  GA  VAG+AL    + S  GD+LM+ AVV+CGLGYAEGA LSR LGGWQVI
Sbjct: 121 PLFWLFSLTGAGLVAGYALMNGGEASAVGDLLMLAAVVVCGLGYAEGARLSRTLGGWQVI 180

Query: 181 SWALLLALPFMAAIALT--VRPDQWAGIGLPAWASLAYVSVFSMLIGFVFWYRGLALGGI 238
           SWALL+ALPFM  + +     PD +A +  PAW S  YVS+FSMLIGFVFWYRGL  GGI
Sbjct: 181 SWALLVALPFMLLLTVVNLPAPDDFARVSAPAWFSFGYVSLFSMLIGFVFWYRGLVQGGI 240

Query: 239 AGVGQLQLLQPFLGLILAAAVLGESIAWPMLAATGVVVLCVAGARHFA 286
           A VGQLQL QPF+GL LAA +L E ++W ML  T   V+CV GAR +A
Sbjct: 241 AAVGQLQLFQPFMGLGLAALLLHEHVSWTMLLVTLGAVICVYGARKYA 288