Pairwise Alignments

Query, 230 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 200 a.a., cold-shock protein from Magnetospirillum magneticum AMB-1

 Score =  150 bits (379), Expect = 2e-41
 Identities = 100/225 (44%), Positives = 115/225 (51%), Gaps = 33/225 (14%)

Query: 1   MSRNRDF--REPRRRGFDDDFAPPRDRGFGGDRPFSSPSSSFSAPAPSGPPIDATVKWFN 58
           M+ NRD   R  R RG  DDF  P    F          SSF     S   + ATVKWFN
Sbjct: 1   MAWNRDNHGRGERGRGRRDDFGEP---AFDPRPSRPMAPSSFDRQMVSQANVSATVKWFN 57

Query: 59  PEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQVTEVLEVDTS 118
             KGFGFV  SDGS D FLH  ALE AG   V  G+ L V +G GQ+G QV  V EVD++
Sbjct: 58  ASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGPQVVMVHEVDST 117

Query: 119 TAEAAPARRSFGDRPGGFGGGGGGGFGGAPRSGGGPRAATGPTEERVGTVKWYNPEKGFG 178
           TA                          APR     R   GPTE   G VK+++ EKGFG
Sbjct: 118 TATPR-----------------------APR-----REERGPTETVEGVVKFFSAEKGFG 149

Query: 179 FIAVEGGGKDVFVHVTVISRSGLSDLAEGQRVMVQVGQGPKGPEA 223
           F+A + GGKDVFVHV  + RSG+  L  GQRV V    G KGP+A
Sbjct: 150 FVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKGPQA 194



 Score = 55.5 bits (132), Expect = 7e-13
 Identities = 26/63 (41%), Positives = 38/63 (60%)

Query: 50  IDATVKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQV 109
           ++  VK+F+ EKGFGFV    G  DVF+H +ALE +G +++  G ++ V    G KG Q 
Sbjct: 135 VEGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKGPQA 194

Query: 110 TEV 112
             V
Sbjct: 195 DTV 197