Pairwise Alignments

Query, 230 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 192 a.a., cold shock protein from Agrobacterium fabrum C58

 Score = 94.0 bits (232), Expect = 2e-24
 Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 35/184 (19%)

Query: 46  SGPPIDAT-----VKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRV 100
           SG  +D T     VKWF+  KGFGF+   +G+ DV LH   L   G +++  G+++   +
Sbjct: 17  SGDAVDLTEITGVVKWFDVAKGFGFIVPDNGTQDVLLHVSCLRRDGYQTILEGTRIVALI 76

Query: 101 GQGQKGRQVTEVLEVDTSTA----EAAPARRSFGDRPGGFGGGGGGGFGGAPRSGGGPRA 156
            +  +G QV  +L +D STA    +  P R      P                  G  RA
Sbjct: 77  QRRDRGFQVFRILSMDQSTAVHPSQLPPVRTHVQVTP----------------HSGLERA 120

Query: 157 ATGPTEERVGTVKWYNPEKGFGFIAVEGGGKDVFVHVTVISRSGLSDLAEGQRVMVQVGQ 216
                      VKW+N  KGFGF+    G +D+FVH+  + R GL++L  GQ V+V+ G 
Sbjct: 121 I----------VKWFNRTKGFGFLTRGEGTEDIFVHMETLRRFGLTELRPGQVVLVRYGD 170

Query: 217 GPKG 220
           G KG
Sbjct: 171 GDKG 174



 Score = 60.8 bits (146), Expect = 2e-14
 Identities = 37/103 (35%), Positives = 48/103 (46%), Gaps = 14/103 (13%)

Query: 23  RDRGFGGDRPFSSPSSSFSAPAPSGPPID-------------ATVKWFNPEKGFGFVELS 69
           RDRGF   R  S   S+   P+   PP+              A VKWFN  KGFGF+   
Sbjct: 79  RDRGFQVFRILSMDQSTAVHPSQL-PPVRTHVQVTPHSGLERAIVKWFNRTKGFGFLTRG 137

Query: 70  DGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQVTEV 112
           +G+ D+F+H   L   G   + PG  + VR G G KG    E+
Sbjct: 138 EGTEDIFVHMETLRRFGLTELRPGQVVLVRYGDGDKGLMAAEI 180