Pairwise Alignments

Query, 291 a.a., Spermidine/putrescine transport system permease protein PotB from Xanthobacter sp. DMC5

Subject, 275 a.a., spermidine/putrescine ABC transporter permease from Agrobacterium fabrum C58

 Score =  157 bits (397), Expect = 2e-43
 Identities = 88/257 (34%), Positives = 145/257 (56%), Gaps = 8/257 (3%)

Query: 20  ASALLLPIAVVNAIGFLWPVVNLLKMSFREAQASGALGAGYNLDTWTNALTDSFTLELIT 79
           A AL LP A+  A  FL PV  LL   FR          G+ L  +    +D     +  
Sbjct: 8   ALALALPAAIFAAAVFLVPVFMLLSEGFRTTD-------GWTLSAYAAFFSDPLNQTVFL 60

Query: 80  NSVGVSLLITVLTLIASYPIALYLHRSTGTWRTMLMVLVVAPLLTSAVVRTYGWIAILSD 139
            ++ +  L+TV++ +  Y  A  +   +   +  ++ LVV PL+ S V RTY WI IL  
Sbjct: 61  RTLKLGALVTVVSAVVGYAAAFAIINLSPGKKGHVVNLVVLPLMISPVARTYAWIVILGR 120

Query: 140 RGLVANALMALGMAEPP-RLMFNLTGVVIGLTEILMPYMILALLSGFGRLDPRLEEAALT 198
            G+V  AL A+G+++ P R++F+ T V IGL ++ +P MI++L+S    +      AA  
Sbjct: 121 TGIVNQALQAVGLSDAPIRILFSETAVFIGLLQLFLPLMIISLISALENMPKDTIAAARV 180

Query: 199 LGASPLKTFWRVVLPLTAPGMALGGLLCFVLAISSFVTPKLLGGGRVFLLATEIYDQAIV 258
           LGA+  + FW+V+LPLT  G+ +GG L F  ++++++TP +LGG +V +L T +Y Q  V
Sbjct: 181 LGANWFQVFWKVILPLTKEGLVVGGTLVFTGSLTAYITPAILGGSKVLMLETLLYQQVTV 240

Query: 259 TLNWPLAAALSMIVLVV 275
           + N+  A+ ++ I++V+
Sbjct: 241 SNNFVAASVIAFILIVM 257