Pairwise Alignments

Query, 372 a.a., Beta sliding clamp from Xanthobacter sp. DMC5

Subject, 366 a.a., DNA polymerase III subunit beta from Dickeya dianthicola ME23

 Score =  268 bits (685), Expect = 2e-76
 Identities = 156/375 (41%), Positives = 226/375 (60%), Gaps = 12/375 (3%)

Query: 1   MKVTVERAELLKSLSHVHRVVERRNTIPILANVLIKAAKGTLELKATDLDLEVVESVP-A 59
           MK  VER  LLK L  V   +  R T+PIL N+L++ ++G L L  TDL++E+V  +   
Sbjct: 1   MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVSEGRLSLTGTDLEMEMVAHLALT 60

Query: 60  ETGQAGATTVPAHVLYDIVRKLPDGAQVQLEAGGERGTLTVRASRARFSLQTLPEADFPD 119
           +  + GATTVPA  L+DI R LPDGA++ +   G+R  + VR+ R+RFSL TLP ADFP+
Sbjct: 61  QPHEPGATTVPARKLFDICRGLPDGAEISVTLEGDR--MLVRSGRSRFSLSTLPAADFPN 118

Query: 120 LAAGEFSHTFKVKGAEFRRLVDKTQFAISTEETRYYLNGIYLHVTEAGGKAMLRAVATDG 179
           L   +    F +  A  +RL++ TQF+++ ++ RYYLNG+     E  G+  LR VATDG
Sbjct: 119 LDDWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLF---ETSGEE-LRTVATDG 174

Query: 180 HRLAQAELEAPAGSQGLPG--VIVPRKTVAEIQKLLEDKEAEVTISLSATKIRVQVGAIV 237
           HRLA   +  P G Q LP   VIVPRK V E+ +LL+  +  + + + +  IR  VG  +
Sbjct: 175 HRLAVCAM--PVG-QSLPSHSVIVPRKGVMELVRLLDGGDTPLQLQIGSNNIRAHVGDFI 231

Query: 238 LTSKLIDGTFPDYGRVIPQGNDKTLIVDKDEFAAAVDRVSTVSSERGRAVKLSLGDGKMV 297
            TSKL+DG FPDY RV+P+  DKTL    D    A  R + +S+E+ R V+L L   ++ 
Sbjct: 232 FTSKLVDGRFPDYRRVLPKNPDKTLEASCDLLRQAFARAAILSNEKFRGVRLYLNQNQLR 291

Query: 298 LSVTNPDSGSATEELEVDYTAEPLDIGFNSRYLLDITSQLEGDTAELKLADPGSPTLVRD 357
           ++  NP+   A E L+V+Y    ++IGFN  Y+LD+ + L+ +   L L D  S   + D
Sbjct: 292 ITANNPEQEEAEEILDVEYGGTEMEIGFNVSYVLDVLNALKCEDVRLLLLDSVSSVQIED 351

Query: 358 STKTDALYVLMPMRV 372
           +    A YV+MPMR+
Sbjct: 352 AASQAAAYVVMPMRL 366