Pairwise Alignments

Query, 356 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 417 a.a., leucine/isoleucine/valine transporter permease subunit from Pseudomonas simiae WCS417

 Score =  124 bits (310), Expect = 6e-33
 Identities = 94/348 (27%), Positives = 155/348 (44%), Gaps = 43/348 (12%)

Query: 15  SYKADQTIFQTRLTLVFVILAIAALCCTPLFASRYVLSLMIQIGYLGIAALGLNILVGFS 74
           S K  Q +   R     +I  I A    P F SR  + +   I    +  LGLNI+VG +
Sbjct: 77  SPKVSQFLTLPRTQRYIIIALIIAALIWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLA 136

Query: 75  GQISIGHAVFFGFGGFASAFLADK-GVPVPLAIVLAGLWTTVVGLIFGLPAARVKGLYLA 133
           G + +G+  F+  G +  A L+   G    + + LAG+     G + G P  R++G YLA
Sbjct: 137 GLLDLGYVGFYAVGAYTYALLSHYLGWSFWICLPLAGMAAATFGFLLGFPVLRLRGDYLA 196

Query: 134 IATLAAQFILQDFFVRAEWFTGGTHGAIAAPF-TLFGYDLSGDA--------RYFYV--- 181
           I TL    I++ F       TGG +G  + P  T FG      A         YF +   
Sbjct: 197 IVTLGFGEIIRLFLRNLTDITGGPNGISSIPKPTFFGLSFDRTAAEGMQTFHEYFGIDYN 256

Query: 182 ----VLFFVVVGYIGA-------TNLMRSRDGRALIAVRDHYLSAEMMGVNLTKYRTMAF 230
               V+F  +V  + A         L+R   GRA  A+R+  ++   +G+N T  +  AF
Sbjct: 257 PVSKVVFLYLVALLLALAALFVINRLLRMPIGRAWEALREDEIACRALGLNPTIIKLSAF 316

Query: 231 GISSFYAGIGGALYAHYVGFMSVEGLDILFSIQFLGMIIIGGLGSIMGSLMGTVFMVLLP 290
            + + +AG  G+ +A   G ++ E    + S   L ++++GG+GS +G ++  + M+LLP
Sbjct: 317 TLGAAFAGFAGSFFAARQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLP 376

Query: 291 EATGWLASALSGSVIDQVLHLKDGITYMREMLIGLTIILFLIFEPDGL 338
           E                   +    +  R ++ G  ++L +I+ P GL
Sbjct: 377 E-------------------MMREFSEYRMLMFGAMMVLMMIWRPQGL 405