Pairwise Alignments

Query, 282 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

Subject, 291 a.a., High-affinity branched-chain amino acid transport ATP-binding protein BraF from Pseudomonas putida KT2440

 Score =  197 bits (501), Expect = 2e-55
 Identities = 114/288 (39%), Positives = 169/288 (58%), Gaps = 35/288 (12%)

Query: 17  LLDVQNISLRFGGLKALSDVSFHVRPGELFSIIGPNGAGKTSMLNCISGRYTPSDGRVVF 76
           +L V N+ ++FGG+KALSDVS  VR  ++F++IGPNGAGKT++ NC++G Y  S GR+  
Sbjct: 6   ILSVDNLMMQFGGIKALSDVSLKVRRNQIFALIGPNGAGKTTVFNCLTGFYKASGGRIEL 65

Query: 77  DGR----DVTKL-----------KPNRRAE---------------IGIGRTFQNLALFSH 106
           + R    +V +L            P R A                 G+ RTFQN+ LF  
Sbjct: 66  NVRGSHTNVIQLLGERFQAADFVSPARFANRMYYKMFGGTHLVNRAGLARTFQNIRLFKE 125

Query: 107 MSVLDNIMVGRHHLLKNNFFTGALYWIG--GAQKEELEHRRKVEEVIDFLDIQHVRKATA 164
           MSV++N++V +H  +  N   G L       A+ + L+H     EV+D +D  +     A
Sbjct: 126 MSVVENLLVAQHMWVNRNLLAGVLNTKAYRKAESDALDHAFYWLEVVDLVDCAN---RLA 182

Query: 165 GTLSYGLRKRVELARAVALEPKLILLDEPMAGMNLEEKEDMARYIVDLNEEWGMTIIMIE 224
           G LSYG ++R+E+ARA+   PK+I LDEP AG+N +E E ++R I  L +E  +T+++IE
Sbjct: 183 GELSYGQQRRLEIARAMCTRPKIICLDEPAAGLNPQETEALSRMIRVLRDEHDITVVLIE 242

Query: 225 HDMGVVMDISHRVMVLDFGRKLVEGEPAAVLADPHVRKAYLGEEDLEI 272
           HDMG+VM IS  ++VLD G  + EG P  +  +P V  AYLG ++ E+
Sbjct: 243 HDMGMVMSISDHIVVLDHGNVIAEGAPQDIRHNPTVIAAYLGADEEEL 290