Pairwise Alignments

Query, 282 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

Subject, 296 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  182 bits (462), Expect = 8e-51
 Identities = 104/284 (36%), Positives = 176/284 (61%), Gaps = 14/284 (4%)

Query: 1   MSLPAASAGAATGVSALLDVQNISLRFGGLKALSDVSFHVRPGELFSIIGPNGAGKTSML 60
           M++ + + G  TG   +L V+++S++FGGL A++D SF  + GE+ ++IGPNGAGKT++ 
Sbjct: 6   MNMTSNTTGNTTG-DTILKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGKTTVF 64

Query: 61  NCISGRYTPSDGRVVFDGRD--------VTKLKPNRRAEIGIGRTFQNLALFSHMSVLDN 112
           NCI+G Y P+ G +    ++        +   +  ++A+  + RTFQN+ LFS ++VL+N
Sbjct: 65  NCITGFYKPTMGMITMRQQNGEAHLLERLPDFEITKKAK--VARTFQNIRLFSGLTVLEN 122

Query: 113 IMVGRHH-LLKNNFFT-GALYWIGGAQKEELEHRRKVEEVIDFLDIQHVRKATAGTLSYG 170
           ++V +H+ L+K + +T   L  +   ++       K +  ++  D+       AG L YG
Sbjct: 123 LLVAQHNALMKASGYTILGLLGLPAYKRAVASSIEKAKYWLEKADLVDRADDPAGDLPYG 182

Query: 171 LRKRVELARAVALEPKLILLDEPMAGMNLEEKEDMARYIVDLNEEWGMTIIMIEHDMGVV 230
            ++R+E+ARA+   P+L+ LDEP AG+N +E   +   +  + +E G ++++IEHDM VV
Sbjct: 183 AQRRLEIARAMCTGPELLCLDEPAAGLNPKESLALNTLLRSIRDE-GTSLLLIEHDMSVV 241

Query: 231 MDISHRVMVLDFGRKLVEGEPAAVLADPHVRKAYLGEEDLEIEE 274
           M IS  V+VL++G+K+ +G P  V  DP V  AYLG ED E+E+
Sbjct: 242 MQISDHVVVLEYGQKISDGSPDHVKNDPKVIAAYLGVEDDEVED 285