Pairwise Alignments

Query, 881 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 602 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas putida KT2440

 Score = 60.5 bits (145), Expect = 3e-13
 Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 12/147 (8%)

Query: 738 TVRDNLLFGRIA-ADRAGA-AATVDDLVRECLKQDGFIAQVERLSLDVALGEGGLPLSAA 795
           TV +N+ +G +A A RA   AA  D   +E      F+ ++ +   D  +GE G+ LS  
Sbjct: 445 TVANNIAYGDLAGAPRADIEAAAADAYAKE------FVDRLPK-GFDTEVGENGVLLSGG 497

Query: 796 ERGKLTLARCLVAEPDLLIIDDALAPLAPSEQSRLIETVLAR-REGRTTLVVLDSAEPLE 854
           +R +L +AR L+    LLI+D+A + L  +E  R I+  L    +GRTTLV+      +E
Sbjct: 498 QRQRLAIARALLKNAPLLILDEATSAL-DTESERHIQAALDHVMQGRTTLVIAHRLSTIE 556

Query: 855 LFAQVIVLAHGQ-VERIEGAAELSVNG 880
              Q++V+  G+ VER      L+ NG
Sbjct: 557 KADQILVMDQGRLVERGTHTELLAANG 583



 Score = 43.1 bits (100), Expect = 5e-08
 Identities = 62/294 (21%), Positives = 120/294 (40%), Gaps = 24/294 (8%)

Query: 196 ATLLIFTQNATLGGCAI-GILALNYVLLGIQRRDNATKLQIYQREAVALGKRVMAGIDRL 254
           A LL    + TL   AI  ++A+   +   + R  + K+Q+   +   +    + G    
Sbjct: 173 AYLLWMNWHLTLVMVAILPVIAVMVSIASKKFRKQSKKIQVAMGDVTHVASETIQGYR-- 230

Query: 255 PLVHGFATSPWERAAVDGRLAVVSEASLD-----LKRQNFTDRVLNLLMSDVPTLVFYFV 309
            +V  F    +E+     R    S+++ D      K  +    +L L++      + + V
Sbjct: 231 -VVRSFGGEAYEQQ----RFGQASQSNTDKQLRMTKTGSLYTPMLQLVIYSAMAALMFLV 285

Query: 310 GGWLALTGAINIGQLVAVVAAYGQIPEPLKELIEWDEKRVVAQVRYDFARYYLETQEVWP 369
              L L G    G LVA + A G +P+P+++L E     V + ++   A      +++  
Sbjct: 286 ---LFLRGDSTAGDLVAYITAAGLLPKPIRQLSE-----VSSTIQKGLAGAESIFEQL-D 336

Query: 370 KGSQDDTGW-ESLPFDGGLKIADLGVVDPAGSL-LLDGVSLEVPAGTAVALKGPDAGGKH 427
           +  + DTG  E    +G L++ +L    P     +L  +S     G  +AL G    GK 
Sbjct: 337 EAPEVDTGTVEKERVEGRLEVRNLSFTYPGTEREVLSDISFVAEPGQMIALVGRSGSGKS 396

Query: 428 AVARVCGRAISLYSGSVRIGGHDLSSVPESVIGRHVAYAGGDPIVLNASLRDNM 481
            +A +  R      G + + G ++       + RHV+       + N ++ +N+
Sbjct: 397 TLAALIPRFYHHDKGQILLDGVEIEHYRLRNLRRHVSQVTQHVTLFNDTVANNI 450