Pairwise Alignments

Query, 264 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 356 a.a., Ribosomal large subunit pseudouridine synthase D from Xanthobacter sp. DMC5

 Score =  102 bits (255), Expect = 9e-27
 Identities = 75/205 (36%), Positives = 106/205 (51%), Gaps = 25/205 (12%)

Query: 11  PAPDTGRDLPLL--HRDGLMLIIDKPCGLPVHAGP-KGGETLADHL-----DALR-FGLP 61
           PA     DLPL     D  +++IDKP GL VH  P     TL + L     D+L   G  
Sbjct: 101 PAEPVAEDLPLTIAFEDDHLIVIDKPAGLVVHPAPGHASGTLVNALLYHCGDSLSGIGGV 160

Query: 62  RAPELAHRLDKDTSGCLVLGRHGKALAQLGKLFA----SGAVGKTYVAVTLGAPAAEAGR 117
           R P + HR+DKDTSG LV+ +   A   L   FA    +G + + Y+A   G P  + GR
Sbjct: 161 RRPGIVHRIDKDTSGLLVVAKSDAAHKGLAAQFADHGRTGPLERAYLAFVWGVPEPK-GR 219

Query: 118 IDQPLAKRSPHRGWWMQSVPKGSPGAQEAITDFQVLH----RTGD--LAVIALSPVTGRT 171
           +D P+ +   HR    +   +GS   + A+T ++VL     +TG    ++I     TGRT
Sbjct: 220 VDAPIDRHPTHR---QKMAVRGS--GRHAVTHWEVLETFVGKTGAEVASLIECRLETGRT 274

Query: 172 HQLRAHLSHLGTPILGDAIYGGASR 196
           HQ+R H++H G P+LGD +YG   R
Sbjct: 275 HQIRVHMAHAGHPLLGDEVYGQGFR 299