Pairwise Alignments

Query, 264 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 320 a.a., ribosomal large subunit pseudouridine synthase D from Pseudomonas simiae WCS417

 Score =  105 bits (261), Expect = 2e-27
 Identities = 73/241 (30%), Positives = 120/241 (49%), Gaps = 25/241 (10%)

Query: 18  DLPLLHRDGLMLIIDKPCGLPVHAGPKGGETLADHLDALRFGLP---RAPE--LAHRLDK 72
           +L +++ D  +L+I+KP GL VH  P  G      L+AL   +P     P   + HRLDK
Sbjct: 82  ELDIVYEDDDILVINKPAGLVVH--PAAGHADGTLLNALLHHVPDIINVPRCGIVHRLDK 139

Query: 73  DTSGCLVLGRHGKALAQLGKLFASGAVGKTYVAVTLGAPAAEAGRIDQPLAKRSPHRGWW 132
           DT+G +V+ +  +A  QL     S +V + Y  + +G   A  G+I+ P+ +    R   
Sbjct: 140 DTTGLMVVAKTIQAQTQLVTQLQSRSVSRIYECIVIGVVVA-GGKINAPIGRHGQQRQ-- 196

Query: 133 MQSVPKGSPGAQEAITDFQVLHRTGDLAVIALSPVTGRTHQLRAHLSHLGTPILGDAIYG 192
             +V +G    ++A++ ++VL R      + +   TGRTHQ+R H++H+  P++GD  YG
Sbjct: 197 RMAVMEGG---KQAVSHYRVLERFRSHTHVRVKLETGRTHQIRVHMAHINFPLVGDPAYG 253

Query: 193 GASRLPGG------------PKLHLHSRRVVVPLKAGAPPVDVSAPLPPHMCETLSLLGL 240
           G  R+P              P+  LH+R + +        +   +PLP  +   LSLL  
Sbjct: 254 GRFRIPPAASATMVDSLKNFPRQALHARFLELDHPTSGKRMSWESPLPDDLVWLLSLLKQ 313

Query: 241 D 241
           D
Sbjct: 314 D 314