Pairwise Alignments

Query, 264 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 318 a.a., ribosomal large subunit pseudouridine synthase C from Pseudomonas putida KT2440

 Score =  109 bits (273), Expect = 6e-29
 Identities = 78/227 (34%), Positives = 117/227 (51%), Gaps = 17/227 (7%)

Query: 21  LLHRDGLMLIIDKPCGLPVHAGPKGGETLA-DHLDALRFGLPRAPEL--AHRLDKDTSGC 77
           +++ D  +++++KP G+ VH    GG  L+   ++ALR   P A EL   HRLD+DTSG 
Sbjct: 97  IVYEDKALIVMNKPAGIAVH----GGSGLSFGVIEALRQLRPDAKELELVHRLDRDTSGL 152

Query: 78  LVLGRHGKALAQLGKLFASGAVGKTYVAVTLGAPAAEAGRIDQPLAKRSPHRGWWMQSVP 137
           L++ +    L  L        V K Y+A+  G       +++ PL K +   G  M  V 
Sbjct: 153 LMIAKKRSMLRHLHAALRGDGVDKRYMALVRGHWPTSKKQVNAPLLKSNLRSGERMVEV- 211

Query: 138 KGSPGAQEAITDFQVLHRTGDLA-VIALSPVTGRTHQLRAHLSHLGTPILGDAIYGGAS- 195
             +   +EA+T F+VL R GD A ++   P+TGRTHQ+R H  H G  I GD+ YG    
Sbjct: 212 --NEEGKEALTLFRVLRRFGDFATIVEARPITGRTHQIRVHTLHAGHMIAGDSKYGDEDF 269

Query: 196 ----RLPGGPKLHLHSRRVVVPLKAGAPPVDVSAPLPPHMCETLSLL 238
               R  GG +L LH+  + VPL  G   + + AP+     +T+  L
Sbjct: 270 SREIRELGGKRLFLHAYALTVPLPDGG-ELKLEAPVDEVWAKTVERL 315