Pairwise Alignments

Query, 492 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-di aminopimelate ligase from Xanthobacter sp. DMC5

Subject, 455 a.a., D-alanyl-D-alanine-adding enzyme from Pseudomonas putida KT2440

 Score = 82.8 bits (203), Expect = 2e-20
 Identities = 128/456 (28%), Positives = 186/456 (40%), Gaps = 56/456 (12%)

Query: 21  GAEEPITGLSSDSRRITPGDLFVAIPGTHADGTRFIADAIARGAAAVLMEPTAPAPILPP 80
           G +   TG+S DSR ++ G LFVA+ G   DG  ++AD  A+GA A L+E    A +  P
Sbjct: 20  GGDATFTGVSIDSRSVSAGQLFVALAGPRFDGHDYLADVKAKGAVAALVEREV-ADVDLP 78

Query: 81  QAALAFTLDARRSLSLAAARVYPRQPQTIAAITGTAGKTSVAFFLRQIWERLGHRAAYLG 140
           Q  +A   D R +L    A       + + AITG++GKT+V   L          A+ L 
Sbjct: 79  QLQVA---DCRLALGQLGALNRAAFDKPVVAITGSSGKTTVKEML----------ASILR 125

Query: 141 TIGLVKPNGATYGSLTTPDPVELHATLDALAGEGVTHMALEASSHGLDQKRLDGVRLSAG 200
           T GLV    AT G+L       L  TL  +A E        A+   L   R+  +R + G
Sbjct: 126 TRGLVH---ATRGNLNNDLGAPL--TLLEIAPEH------SAAVIELGASRIGEIRYTVG 174

Query: 201 -------GFTNLGRDHLDYHPTMDAYFRAKLRLFTEVMPLDAAAVAVTSAPFAA-TALAW 252
                     N G  H+      D    AK  +   +     A + +    F    A A 
Sbjct: 175 LTQPQVVIINNAGTAHVGEFGGPDKIVEAKGEILEGLGQGGIAILNLDDKAFDIWKARAG 234

Query: 253 AH--TRGLRLLPIGEGRADGIDIAAATGSPAGQKVMFADGTSAVVPLVGRFQLDNALLAA 310
           AH      R  P  +  A  I    A G P+       +  +  + ++G   + NAL AA
Sbjct: 235 AHKVVSFARSNPKADFHASDIG-RDARGCPSFTLHGAGETVAVQLNVLGEHNVSNALAAA 293

Query: 311 GLAIACGADRTEAFAALAHLKGVPGR-LERIGDDPRRPVFVDYAHKPEALATVLDTLRAA 369
             A A G   +   A LA ++ V GR + +I  +  R +   Y   P ++   +D L A 
Sbjct: 294 AAAHAVGLSLSGIAAGLAAVQPVKGRTVAQIAPNGVRVIDDSYNANPTSMCAAIDIL-AG 352

Query: 370 IPGRLVVVVGCGGD----RDRGKRPIMGAIAAMKADTVIVTDDNPRSEDPAAIRAEVLEG 425
             GR V+V+G  G+     + G R + G  A  K D +     N       A++A    G
Sbjct: 353 FSGRTVLVLGDIGELGQWAEEGHRQV-GDYARGKVDALYAVGSNMTH----AVKA---FG 404

Query: 426 ARGAGIGNVREIGDRAEAIRAGVALIESGDALLVAG 461
           A G      R    +AE I A  A   S   +L+ G
Sbjct: 405 ANG------RHFATQAELIDAVSAENASDTTILIKG 434