Pairwise Alignments

Query, 518 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Xanthobacter sp. DMC5

Subject, 496 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Pseudomonas putida KT2440

 Score = 79.0 bits (193), Expect = 4e-19
 Identities = 80/273 (29%), Positives = 113/273 (41%), Gaps = 37/273 (13%)

Query: 111 ARRSPFVAITGTNGKSTTTALITHILRVAGRDVQMGGNIGTAILS------LAPPKP--- 161
           +R+   V +TGTNGK++ T L+   L + G+   + G +GT          L  P P   
Sbjct: 99  SRQLNLVGVTGTNGKTSVTQLVAQALDLLGQRCGLIGTLGTGFYGELQSGRLTTPDPIAV 158

Query: 162 -----------GRVHVVECSSYQIDLA--PGLDPSVGVMLNITPDHLDRHGTIENYAAVK 208
                       R   +E SS+ ++      L+  + VM N++ DHLD HG++E Y A K
Sbjct: 159 QSTLNDLKKGGARAVAMEVSSHALEQGRVAALEFDIAVMTNLSRDHLDYHGSMEAYEAAK 218

Query: 209 ERLVTGVEQTGTAVVGVDDDFSAAM-ADRAERAG-----KHVVRISVRRPLPDGIWREGE 262
            +L          VV +DDDF   + AD A R         ++  S+  P      RE  
Sbjct: 219 AKLFAW-PSLRCQVVNLDDDFGRRLAADFARRPSVDHIETRLLSYSLESPEASLFCREA- 276

Query: 263 TLVVSEGGAEVFRLPLGGIGSLR----GAHNAQNAAAAYAACRALGVAPEVIAVAMKRFP 318
             V S+ G     +   G   LR    G  N  N  AA A   AL  A + I     +  
Sbjct: 277 --VFSDDGVRATLVTAQGERILRSQLLGRFNLSNMLAAVATLLALDYALDEILKVTPQLQ 334

Query: 319 GLAHRMEEVGNKGKVLFVNDSKATNADAAERAL 351
           G   RM+ +G   K L V D  A   DA E+ L
Sbjct: 335 GPVGRMQRLGGGDKPLVVVD-YAHTPDALEKVL 366