Pairwise Alignments

Query, 438 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 684 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  101 bits (252), Expect = 6e-26
 Identities = 84/236 (35%), Positives = 119/236 (50%), Gaps = 31/236 (13%)

Query: 63  SNGNARKLAGETTSASSAVAQIAATIETIAQLGADAGKETGDALRLVTSGAAKTRTAGQA 122
           ++G A  +AG T  AS+ V  +AA  E +     + G++   +  +  SGAA        
Sbjct: 446 TSGRATTVAGATELASANVQTVAAAAEELTSSIQEIGRQVHRSAEI--SGAA-------- 495

Query: 123 MSGISEAFGELEARLAHLNSATQSIGGFATSIGSISRQTKLLALNATIEAARAGEAGRGF 182
              +SEA GE +  +  L S  + IG     I  I+ QT LLALNATIEAARAGEAG+GF
Sbjct: 496 ---VSEA-GEAQGTVTGLASMVKKIGEVVILINDIAAQTNLLALNATIEAARAGEAGKGF 551

Query: 183 AVVAAEVKALSEEASRTTDLIRDQLQALSVVVKDMLDAMG-------------AG-ATRV 228
           AVVA EVK L+ + +R TD I  Q+ A+    + ++ A+G             AG A+ V
Sbjct: 552 AVVAGEVKNLATQTARATDEIGQQISAVQQQTEKVVLAIGDIVAIIREVGEITAGIASAV 611

Query: 229 EEGRAIVESVMTDMDGI---ETRVSASADGVGRIAVMLGERRAALRDLADRLGEIA 281
           EE  A  + +   ++      T VSA+  GV   A   G   A + D +  +GE A
Sbjct: 612 EEQSAATQEIARSVEQAAAGTTEVSANVGGVQDAANRTGFAAAEVLDASRIMGEEA 667



 Score = 40.8 bits (94), Expect = 1e-07
 Identities = 90/398 (22%), Positives = 147/398 (36%), Gaps = 50/398 (12%)

Query: 68  RKLAGETTSASSA-----VAQIAATIETIAQLGADAGKETGDALRLVTSGAAKTRTAGQA 122
           RK+  E+T+  +       A  AA  E I  L     +   D L L +  ++  R    A
Sbjct: 255 RKIGLESTATGNVGDVTGPAWFAAATERINLLKTVEDRMAADVLALASQVSSDARGVLGA 314

Query: 123 MSGISEAFGELEARLAHLNSATQSIGGFATSIGSISRQTKLLALNATIEAARAGEAGRGF 182
                  FG L A    L  A   +    ++IGS+    + L+ N         E G   
Sbjct: 315 T-----IFGVLAAAAVALAVAWAVVRQMTSAIGSLVGTMERLSANDFSVIVGGTERGDEM 369

Query: 183 AVVAAEVKALSEEASRTTDLIRDQL------QALSVVVKDMLDAMGAGATRVEEGRAIVE 236
             +A  V+   +   R  DL   QL      +A    ++ +++     A R+ E    V 
Sbjct: 370 GAMARSVQIFKDAMLRGHDLAEQQLADAHSREARGHAIEALVNRFQGSAERMVEA---VS 426

Query: 237 SVMTDMDGIETRVS-ASADGVGRIAVMLGERR----------AALRDLADRLGEIARLAN 285
           S    + G  + +S A++D  GR   + G             AA  +L   + EI R  +
Sbjct: 427 SAAQQLQGTASAMSDAASDTSGRATTVAGATELASANVQTVAAAAEELTSSIQEIGRQVH 486

Query: 286 QNETDSATAAGLLGRADAIAGDLISRASAGAGATAAIRRLKSDHMAWKRSLAECLAGVTA 345
           ++   S  A    G A      L S           I     + +A + +L    A + A
Sbjct: 487 RSAEISGAAVSEAGEAQGTVTGLASMVKKIGEVVILI-----NDIAAQTNLLALNATIEA 541

Query: 346 ADLRGFQARNAPLGGGFAGIDGAAVEDPAVLSQLAA--LGRQLA---DCGERIVAGTASG 400
                  AR    G GFA + G  V++ A  +  A   +G+Q++      E++V   A G
Sbjct: 542 -------ARAGEAGKGFAVVAG-EVKNLATQTARATDEIGQQISAVQQQTEKVV--LAIG 591

Query: 401 DMGGAIDAYMAMDALSADALTQMARLTPRRSKGVSAAA 438
           D+   I     + A  A A+ + +  T   ++ V  AA
Sbjct: 592 DIVAIIREVGEITAGIASAVEEQSAATQEIARSVEQAA 629