Pairwise Alignments

Query, 384 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 283 a.a., RepA from Sphingobium sp. HT1-2

 Score =  108 bits (271), Expect = 1e-28
 Identities = 78/240 (32%), Positives = 114/240 (47%), Gaps = 13/240 (5%)

Query: 27  RDAQDLMAYPFFSLSKTHRIAPIDFAAGDVSIRVEAVPD-HGMATIWDADILIWAASQIV 85
           R  + LMA+PFF+LSK     P+ +  G VSI  E VP   G ATI+D +I+++ AS ++
Sbjct: 20  RGDRSLMAFPFFALSKGKWTKPLAYDNGTVSI--EIVPTAKGAATIYDKEIVLYIASLMI 77

Query: 86  EARDAGLRTSRFMVATPYEILRFVGRGTSLRDYQRLKAALDRLQSTTVSTSIRQPAEGRR 145
              +AG   ++    T +++    G   S R Y RL  AL+RLQ T + T+I    EG  
Sbjct: 78  ARLEAGEEVAQEFHFTAHDLFCVTGNNPSARSYSRLSQALERLQGTQIKTNIEAGGEGEE 137

Query: 146 HRFSWINEWKERTDRD-------GRPAGIELIVPDWFYCAIVEDALVLTIDRAYFELTGG 198
             FSW++E K    R+        R   I + + DW Y AI+ D  +L     YF+L G 
Sbjct: 138 GYFSWLSEAKLYYTRNKDAQSDVRRLKAIRVRLCDWLYRAILHDRQILNYANGYFQL-GP 196

Query: 199 LDRWLYRLVRKHGGRQHAGWRFDFRHLHLKSGSLSPFKRFAFELRDIIRRQPLPGYTLFL 258
           ++R LY + R            D   L  + G  +    F   L+ I     +P Y L L
Sbjct: 197 VERRLYEIARSTCAT--GPHEMDLDELRRQLGYQNSLPHFRHALKAIAEADAIPDYRLVL 254