Pairwise Alignments

Query, 415 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 395 a.a., Conjugative transfer protein TrbI from Sphingobium sp. HT1-2

 Score =  286 bits (732), Expect = 8e-82
 Identities = 167/385 (43%), Positives = 216/385 (56%), Gaps = 22/385 (5%)

Query: 31  MRLRPEPPRVTRLSRKVLAGLGLVAGLGIGGALIYALQARKDH--GPSQELYATDVKTTP 88
           + LR  P R  R  R  + G+       +      AL+ +  H   P  EL      +  
Sbjct: 18  LALRSRPTRAIRFRRGAIIGIAAAGSASLMAIAWLALKPQVLHRQAPDSELSQPVAGSAS 77

Query: 89  DGLAGLPKDYTGIPKLGPPLPGDLGRPILNAQTAVQPTMPSMGGIPNPALSPEEQRQQQ- 147
           D LAGLP  Y   PKLGPPLPGDLGRPIL AQ  VQ       G P PA   E +RQQ+ 
Sbjct: 78  DALAGLPSSYGDAPKLGPPLPGDLGRPILRAQQRVQDA-----GTPAPADDAEARRQQRL 132

Query: 148 -ESEAARTGRLFAQTNTRPASTVVAQQVSAASATTAAPVPDLTSLGLAPPAATPTAQERQ 206
            + +AAR   L  Q    P S     + S   +T     P  TS          T +ER 
Sbjct: 133 AQIQAARESGLLVQVAAGPGSPSGTPRTSTEGSTENPATPAETSA---------TRKER- 182

Query: 207 TAFLNQAVDRRTMSPDRVAAPASANILQAGAVIPAALITGIRSDLPGQITAQVTENINDS 266
             F     D    +P  +  P S N+L AG+VI A+ ITG+ SDLPG +TAQVT+N  D+
Sbjct: 183 --FAKARDDGPDFNPHGLVPPVSPNMLLAGSVIAASFITGLNSDLPGMVTAQVTQNAYDT 240

Query: 267 PTGRILLIPQGTRIIGQYDNGVGFGQRRVLLVWNRLIFPNGRSIVLERQPGADAEGYAGL 326
            TGRILLIPQG+R++G+YD+ V FGQ+R L+VW RLI P+G S+ L+  P  D  GYAGL
Sbjct: 241 VTGRILLIPQGSRLVGKYDSVVAFGQKRALVVWQRLILPDGSSVRLDNMPATDPSGYAGL 300

Query: 327 EDGVDYHWVELFKAAVLSTILSVGASAGTSGSDSDLASALREGASDSISQTGRQIVQRQL 386
            D VD+H   L K   ++T+L VG+     G +SDL  A+R+ A  S S+ G QI QR L
Sbjct: 301 SDKVDFHTWSLLKGVAIATLLGVGSELSIDG-ESDLVEAMRQSAQTSTSRAGDQITQRNL 359

Query: 387 NIAPTLTIRPGYPVRVMVTRDLVLE 411
           ++ PT+T+RPG PVRV+VTRDL++E
Sbjct: 360 DVQPTITVRPGAPVRVLVTRDLLIE 384