Pairwise Alignments

Query, 479 a.a., ATP-dependent DNA helicase Rep from Xanthobacter sp. DMC5

Subject, 593 a.a., Superfamily I DNA and RNA helicases from Enterobacter asburiae PDN3

 Score = 42.7 bits (99), Expect = 3e-08
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 5/145 (3%)

Query: 36  THAACDVFGDRTKGLSGLEIRTIDSLIGQIAEAYPEPGLIAGALPDYDRNSRWAAGLLKR 95
           TH  CD +   T    G        +I ++ + Y +  L A    D++    +A  L++ 
Sbjct: 132 THWDCDYYVTETGYKLGCVDMGKHPIIHKVLKLYFDE-LAANRQIDFELILWYAYSLMRD 190

Query: 96  RPFIADMLARRYPMVVCDEHQDASAEQHAVIESLHGAG---ARVRAFFDPMQRIYGAGAT 152
           R  IA +L+R +  ++ DE+QD    Q+ ++ S+  AG    ++    DP Q IYG+   
Sbjct: 191 RSQIAVLLSRVFSHILVDEYQDTKQIQYTIVTSILRAGNGQIKILIVGDPNQAIYGSLGG 250

Query: 153 EAQGQADDSRLAAFRAAADVAESLD 177
            A    D+ R  A  +  ++A SL+
Sbjct: 251 YAM-PVDEFRTLAGISIKELALSLN 274



 Score = 26.9 bits (58), Expect = 0.002
 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 8/55 (14%)

Query: 421 VSTIHKAKGLEAPNVVIMPC-DGTT--FREKD-----RRLLYVAISRASRNLTLV 467
           VSTIH  KG E   V+     +G    F E +      +LLYV  SRA +NL L+
Sbjct: 510 VSTIHGVKGAEFDVVIAFGLLEGMVPHFNEANGSAAASKLLYVLSSRARKNLHLI 564