Pairwise Alignments

Query, 402 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 390 a.a., branched amino acid ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 77.4 bits (189), Expect = 7e-19
 Identities = 97/376 (25%), Positives = 162/376 (43%), Gaps = 28/376 (7%)

Query: 8   LAAASVVVAAGAAKAQVPVKIGVLNDQSGLYADLGGQGSVWAAKKAVEDFGAAAKGLKV- 66
           + AA V +   +A     +K+GV+   SG +A L G+       KA  D   A  G KV 
Sbjct: 5   ITAAIVAICFSSAAYAETIKVGVVGPFSGPFA-LQGKNF-----KAGIDAWFALHGNKVG 58

Query: 67  ----DVIFADHQNKADVGTS--IARQWYDVDGVDVILDVPNSGVALAVSGVTKEKNKVFI 120
               +V++ D   +AD   S  +A++    + V  +     +  A+AV+ + K+ N   +
Sbjct: 59  NDTVEVVYRDVP-QADPAQSKALAQELVVKERVQYLAGFYFTPDAMAVTPLLKQGNVPMV 117

Query: 121 NSGAATSDLTGKACTPNTVHWTYDTWALANGTGQAIVKTGGDTWFFLTADYAFGHALERD 180
              AATS +  K+  P  V  ++ TW  +    +     G      L +DY  G   E  
Sbjct: 118 VMNAATSAIVTKS--PYVVRTSFTTWQTSTPIAKVAFDGGVKKVISLVSDYGPGVDAENA 175

Query: 181 TSKVVAENGGKVVGSVKVPLNNADFSSFLLQAQSSKAK-VIGLANAGGDTINSIKQSAEY 239
                   GG+VV ++++PL+  DFS  + + + S A+ V     +G  T+  +K   + 
Sbjct: 176 FKAAFTAAGGEVVETIRMPLSTNDFSPIMQRVKDSGAQGVFAFLPSGPTTLGFVKAFNDN 235

Query: 240 GIVEGGQKL--AGLLIFLTDVHSLGLKTAQGLTLTEAW-YWDQTDANRKFADAFAAANGG 296
           G+   G KL   G L   +D+ +LG + A G+  T  +     +  N+ F +A A A G 
Sbjct: 236 GLKSSGVKLFAPGDLTQESDLPALG-EAALGMQTTFHYAVSHDSPENKTFVEAAAKAIGN 294

Query: 297 -KRPTMVQAGVYAGTLHYLKAVEALKSAKDGAAVVAKMKEIPTDDPLFGKGEVRVDGRTI 355
            K  +      + G     K +EA    +D    V  +K +    P   +G V +D  + 
Sbjct: 295 PKELSFPAVSAFDGMYVISKMIEATGGKQDAEKAVEAVKGLSWTSP---RGPVSIDPESR 351

Query: 356 H---PMYLYEVKKPSE 368
           H    +YL EV K  +
Sbjct: 352 HITQNIYLREVAKADD 367