Pairwise Alignments

Query, 329 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 618 a.a., ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  145 bits (366), Expect = 3e-39
 Identities = 97/295 (32%), Positives = 151/295 (51%), Gaps = 9/295 (3%)

Query: 25  AVAAVAVLLVAPF--GVYPVFLM-KVMCFALFACAFNLLLGYTGLLSFGHAMFFGGSAYI 81
           A A + VLL  P   G Y + +  +V+ FALFA + + ++G  G++SFGHA +FG  +Y 
Sbjct: 315 AFAGLVVLLALPMVGGSYGLSVASEVLIFALFAASLHFMMGTGGMVSFGHAAYFGLGSYG 374

Query: 82  CAHTTKVLGFTPELALLAGVAFSAALGLLAGLLAIRRQGIYFAMVTLALAQMFFFFCLQ- 140
            A   K  G     AL+ G   +AA  L+ G   +R  G Y AM+TLA AQ+ +    Q 
Sbjct: 375 AALMVKYFGIPMLAALVTGPLLAAAAALVFGWFCVRLAGAYLAMLTLAFAQIAYAVVFQW 434

Query: 141 AKFTGGEDGLQAVPRRPLFGVIDISQDIHLYYFVLAIFLFGFFVIYRTIHSPFGQVLKAI 200
           + FTGG++GL  +   P       +  +  YY  LA+   G   + R   +PFG  L+A 
Sbjct: 435 SSFTGGDNGLIGIWPAPW-----AANPVAFYYLTLALCGGGILAVRRITFAPFGYTLRAC 489

Query: 201 RENEPRAISLGYRANQYKLLAFVLSAALAGLAGSTKVLVFQLASLTDVAWQMSGEVVLMT 260
           R++  RA S+G   + ++   F L+   AG+AGS    +        ++   S + ++M 
Sbjct: 490 RDSALRADSIGINLSSHRWAGFALAGFFAGIAGSLYAFLKGSVFPDTISIATSVDGLVMV 549

Query: 261 LVGGMGTVLGPVVGAAVIVTMQNYLAGLGEWVLVIQGVIFVLAVSLFRRGFVGEV 315
           L+GG+ T+ GPVVGA V  T+   ++   +      GVI ++ V  F +G  G V
Sbjct: 550 LLGGVQTLTGPVVGALVYKTLHVTISSYTDQWRTALGVIIIVLVVAFPQGISGFV 604



 Score = 58.5 bits (140), Expect = 4e-13
 Identities = 67/244 (27%), Positives = 110/244 (45%), Gaps = 28/244 (11%)

Query: 52  LFACAFNLLLGYTGLLSFGHAMFFGGSAYICAHTTK------VLGFTPELALLAGVAFSA 105
           L A   +++ G + +++F H  F+   AY+     +      V GF   + L A     A
Sbjct: 20  LVASGLSIIFGVSRIVNFAHGSFYMLGAYMAFTLVQKLSGGTVFGFWGAIVLAAAAV--A 77

Query: 106 ALGLLAGLLAIRRQGIYFAMVTLALAQMFFFFCLQAKFT----GGEDGLQAVPRRP-LFG 160
            +G +  ++ +RR  IY A   L L   F    +         G ED L   PR P L G
Sbjct: 78  LVGAVVEMVLLRR--IYQAPELLQLLATFGLVLIVQDLVLVLWGPEDLLG--PRAPGLKG 133

Query: 161 VIDI-SQDIHLYYFVLAIF---LFG--FFVIYRTIHSPFGQVLKAIRENEPRAISLGYRA 214
            IDI  Q    Y FVL I    + G  + + +RT    +G +++A  ++     +LG   
Sbjct: 134 AIDIFGQSFPQYDFVLIILGPVVLGLLWLLFHRT---RWGTLIRAATQDREMVAALGVNQ 190

Query: 215 NQYKLLAFVLSAALAGLAGSTKVLVFQLASLTDVAWQMSGEVVLMTLVGGMGTVLGPVVG 274
                  F L A LAGL G+ ++    +  + D+  Q+  E  ++ ++GG+G+VLG  + 
Sbjct: 191 AWLFTSVFTLGAFLAGLGGAVQLPREAVNHVMDL--QIITEAFVIVVIGGLGSVLGAFLA 248

Query: 275 AAVI 278
           A +I
Sbjct: 249 AVII 252