Pairwise Alignments

Query, 403 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 354 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score = 57.8 bits (138), Expect = 5e-13
 Identities = 80/334 (23%), Positives = 136/334 (40%), Gaps = 31/334 (9%)

Query: 56  LLTAIVLWLLSGILLPFVAGIVLAYFLNPVVARLE-----RIGVARTLSALVVVGIMLLL 110
           +L A+V      ILLP+   I  A  L  + A L+     R G  R L+A     + LL+
Sbjct: 13  VLLALVTIAFFWILLPYYGAIFWAVILGILFAPLQRHLLIRCGRRRNLAAATSTLVCLLV 72

Query: 111 VMLFFLLALPILSSQLFEFIQRLPS-------YVTRLQGLLTEENREWLSGIVGDRLPDM 163
            +L  ++   +L  +     QR+ S       YV R + +L    +  L  +    L  +
Sbjct: 73  AILPVIIISALLVQEGATLYQRIESGQLDIAGYVERGKDMLPAFAQRGLDNMGMGNLDGL 132

Query: 164 QRSISDLMTQGVSHVLSLLSSVWSGGQALLSLFALLVVTPVVVFYILCDWNEMVGLVDRL 223
           +  I+   TQG S VL+  S  +S GQ          +   ++F+ L D  E+   V   
Sbjct: 133 RDKITKWATQG-SQVLA--SQAFSFGQGTFEFLISFGIMMYLLFFFLRDGPEVARRVRMA 189

Query: 224 VPVPHRPVVRGLARAMDNAVAGFVRGQATVCLLLGGFYAVSLSMVGLNFGLLIGIVSGVI 283
           VP+P     R L    +  V   V+G   V +  G        ++ +   L+  ++   +
Sbjct: 190 VPLPEHQ-KRRLQLKFNRVVRATVKGNVLVAITQGALGGFIFWVLDIPSALVWAVLMAFL 248

Query: 284 TFIPYVGS------LTGFVLAMGVAIVQFFPDWSMIGTVLAIFVAGQTIEGYVLAPKLVG 337
           + +P VG+      +  + L  G AI+Q      ++ T   + V G  +   VL P LVG
Sbjct: 249 SLLPAVGAGIIWAPVAAYFLLTG-AILQ-----GVVLTAFGVLVIG--LVDNVLRPILVG 300

Query: 338 DSIGVHPVWLMFALFAFGYLFGFVGLLLAVPLTA 371
               +    ++ +      +FG  G ++  PL A
Sbjct: 301 KDTRMPDYLILVSTLGGLAVFGLNGFVIG-PLIA 333