Pairwise Alignments

Query, 308 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 381 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  107 bits (267), Expect = 4e-28
 Identities = 75/216 (34%), Positives = 111/216 (51%), Gaps = 21/216 (9%)

Query: 98  WLLMTESVSASGWMLCI--------------ASDITTLKADGRDVRQARDRAIKEAQTDD 143
           WLL+  S    G  L +              +S +TT      ++++A   A+  + TD+
Sbjct: 157 WLLLQPSTLQQGIALAVLVFAWFVVSATQSLSSALTTAWRLKHEMQRAHRLAMVASCTDE 216

Query: 144 LTGIANRR--FITARVDDMLAPGA-LGGALCVLDLDNFKYINDLVGHLAGDAVLRDFAAR 200
           LTG+ NRR  F  A    +    A    A+ +LD+D+FK IND  GH AGD VL+   A 
Sbjct: 217 LTGLNNRRAFFDNASAQHVRCRDAGTFMAVLMLDVDHFKQINDTFGHAAGDQVLQRIGAA 276

Query: 201 INGLIRRKDCFGRIGGEEFVLVLPQTSAAEAVLIVERMLSLVRQSRPLPQWPDFAYTFSA 260
           I+  +R  D  GR+GGEEF ++LP T    A+ + ER+ +L+ + R   + P    T S 
Sbjct: 277 ISASLRDNDIAGRLGGEEFAILLPNTPPDTAIEVAERLRALIAKLRVNDEHP---VTASI 333

Query: 261 GIA-TGGPGTTFTDLYGRADRALYMAKMGGRNRIQV 295
           G+A    P T    L   AD A+Y++K+ GRNR+ V
Sbjct: 334 GLAFAKAPATELGALLSSADSAMYLSKVSGRNRVTV 369