Pairwise Alignments

Query, 1299 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 730 a.a., Gene Transfer Agent host specificity protein from Sphingobium sp. HT1-2

 Score =  159 bits (403), Expect = 7e-43
 Identities = 99/216 (45%), Positives = 134/216 (62%), Gaps = 23/216 (10%)

Query: 1   MATLLLGAAGGLIGGALFGPIGAVAGRALGALGGSVIDGALLGGNRSRHAEGPRLTDLDV 60
           MAT++L A    +G AL GPIG     A+G L G+V+D  +L   + R  EG RL+DL +
Sbjct: 1   MATMVLTA----VGTALGGPIGG----AIGGLIGNVLDREVLFKAKGR--EGARLSDLQL 50

Query: 61  MASTAGAPLPRIYGRARLAGQVIWALKLKEVKKEETQSVGGKGGSLSASTTTYTYYANFA 120
             S+ G  +PR++GR R+AG VIWA  L+E++   T+S G KG     S+T+Y+Y A+FA
Sbjct: 51  QTSSYGTQMPRLFGRMRVAGTVIWATDLREIR---TKSGGSKG---QGSSTSYSYSASFA 104

Query: 121 VALCEGPVSRIGRIWADGKLL-------DTRRLHITTHLGGADEAPDSWIEAKQGEVGTP 173
           VAL    V  IGR+WADG LL        T+      H G  D+APD  I + QG   TP
Sbjct: 105 VALSARGVRSIGRVWADGNLLRGAAGDFKTQVGAFRLHDGDEDQAPDPLIASAQGAGMTP 164

Query: 174 AYRGVAYLVFRNLDLTDYGNRLPQITVEVERAIGAL 209
           A+RG+AY+VF +L L+DYGNR+P +T EVE   GA+
Sbjct: 165 AHRGIAYVVFEDLLLSDYGNRIPSLTFEVEADAGAV 200



 Score =  116 bits (290), Expect = 8e-30
 Identities = 151/536 (28%), Positives = 218/536 (40%), Gaps = 32/536 (5%)

Query: 756  GAAPLDALVATLA-ADFGIADVDSARLSGAVEGYVVEQPMTARAALEPLARAFAFEAGEE 814
            GA  +DA+V  L+    G A  +       VEG+         A + PL  A+      E
Sbjct: 198  GAVTIDAIVGALSEGQMGCAAAEE------VEGFAASGADLGEA-IAPLVEAYGLGLCGE 250

Query: 815  DGRMVFCPRGQGEVAEIATDNLVQVEGTPLLAVTR--AQETELPLEVTVGFVDALRDYRR 872
             G  +    G    +        ++ G  +  V R  A    + L ++V   D  RDY+ 
Sbjct: 251  -GAQLAGDAGPAVASLDPATRCSRINGRAIDPVERSSAGADSVALALSVRHHDPARDYQ- 308

Query: 873  ATVSSRRLAGRSRHVTQADLAVVASDAVMVRAADVWLQDLWAGRETLSFSLPPSCLALAP 932
            A V      G  R     +L  V S       A   L  +WAGR+ ++       L L P
Sbjct: 309  AGVQRVTRPGPGRIERGIELPAVLSGGAARSLARQRLDGIWAGRDRMTVRGDWRALELEP 368

Query: 933  GDLVRLT-FDGRTRLVEIVRVEEAEALAITARTIEPEVFDVALAEEGAGAIV--LPGASG 989
              +V L    G  R+ E  R  EA A+ +  R +       A     +G IV  L    G
Sbjct: 369  WMIVTLADAPGLWRIEE--REWEAMAVRLALRRLAG-TGGRAPGSVSSGQIVRQLDAPHG 425

Query: 990  PPAVRVLDLPALSEAEPVPLQWLAAAASPWPG--TLAIWRSTDGASFETLAPVTASATFG 1047
            P  + + DLP L++      Q L AAAS  PG  + A++    G + E +      A  G
Sbjct: 426  PTWLMLADLPRLTDGVASGPQ-LVAAASGGPGWRSAALYALDAGGTAEPIGRTAPRAVMG 484

Query: 1048 TLTAPLAPGPLWRFDRHNGMEVTL--QTSLLVSAGEAEVLAGANLLVLLAEDRAPEIVAF 1105
             + A L PG     D  N + VTL  +   L SA  A +  G NL ++       E++ F
Sbjct: 485  QIDAALPPGSTLLLDMVNSLSVTLLAEDMELASADGAALAQGRNLCLV-----GQELIQF 539

Query: 1106 TEAELVDAGSYRLTGLLRGLAGTEAAGAETWSAGTRLVRLDGTLVSVASGVAALGRSFIY 1165
              A      SYRL  L RGL GTE A A    AGT  + ++   +     +A +      
Sbjct: 540  GRAVRTGPASYRLEALRRGLRGTEWAMAGQ-EAGTPFLLIEADRLVDPLAMAGMEGDIGA 598

Query: 1166 RVGSARDDQGAEEVTEVSATVSGRALAPLSPVHVRARRTAAGV-ALSFIRRTRIAGDGWD 1224
             +G      G  E       + G AL P +PVH+ A    AG   + + RR+R AG  W 
Sbjct: 599  AMGLLAIGIGDVEPATAEVMIGGAALVPPAPVHLNAAPDGAGGWRIGWTRRSR-AGWRWS 657

Query: 1225 AV-EVPLGEASEAYRLDILDGETVRRSLSLTSPEALYAAADEIADFGAPQVELTVR 1279
            +  +VPL E SE Y L +L+G+ + R   +T P   Y  A    D  +  + + VR
Sbjct: 658  SGGDVPLAEESERYELRVLEGDRLVRRAEVTEPGWTYDVAMIAMDGVSGPLSMDVR 713