Pairwise Alignments

Query, 346 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  191 bits (486), Expect = 2e-53
 Identities = 108/263 (41%), Positives = 168/263 (63%), Gaps = 6/263 (2%)

Query: 85  GLLILAVVVGAALAAPILFPDDPLEM-AGRPLQWPGQNPRFPLGTDALGRDVLAGLVHGA 143
           GLL++ V+V  AL AP++ P DPL+      L+ P  +  F LGTD  GRDVL+ L++G 
Sbjct: 30  GLLVMIVLV--ALFAPLIAPYDPLQQNIAYRLEPP--SAEFWLGTDTYGRDVLSRLIYGT 85

Query: 144 RVSLLVGACATLAGLLAGILVGATAGYFGGVVDDVLSKLIEIFQTVPGFILLIVLVAIAQ 203
           RVSLLVG  A +  ++ G  +G  AGY GG+ D +++  +++  + P  +L +++ A+  
Sbjct: 86  RVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFPTLLLGLMVAAMLG 145

Query: 204 PSVPAIALAIAAVSWPQVARLVRAQFRAIKEKDFVAAARALGFGHGRIIFREILPNALPP 263
            S+  + +AIA        R+ RA   A+K++DFV A R+LG+G GR++   ILPN +  
Sbjct: 146 ASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGRLMTVHILPNMISE 205

Query: 264 VIVLASVTVATAILMESALSFMGLG-DPNVVSWGSMIGTGRDLLRTAWYLSAVPGVAIVL 322
           V+VL ++ +ATAI  E++LSF+GLG  P   +WGSMI  G + +  AW+L+  P +AI+L
Sbjct: 206 VLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDAWWLTVFPSLAILL 265

Query: 323 TVLSLNLIGDGLNEALNPRLGGE 345
           TVL+L+L+GD L +A +P+   E
Sbjct: 266 TVLALSLLGDALRDANDPKTRSE 288