Pairwise Alignments

Query, 346 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  204 bits (519), Expect = 2e-57
 Identities = 113/289 (39%), Positives = 175/289 (60%), Gaps = 6/289 (2%)

Query: 60  DVARLAPVGRRHALLVFLSNPTAVAGLLILAVVVGAALAAPILFPDDPLE-----MAGRP 114
           D + L P   +     F  N  AV GL  + +VV  AL AP + P DP E     +   P
Sbjct: 16  DQSLLYPSPYKEFWQAFARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSEQYRDFLLTPP 75

Query: 115 LQWPGQNPRFPLGTDALGRDVLAGLVHGARVSLLVGACATLAGLLAGILVGATAGYFGGV 174
           +   G   +F LGTD LGRD+L+ L+ GAR+SLL+G  + +  L+ GIL+G  AG+F  +
Sbjct: 76  VWLEGGTWQFILGTDELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQL 135

Query: 175 VDDVLSKLIEIFQTVPGFILLIVLVAIAQPSVPAIALAIAAVSWPQVARLVRAQFRAIKE 234
           +   + +L+++   +P  +L + +VAI  P +    +AIA VS P   RL RA       
Sbjct: 136 LGPSIMRLMDVMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELN 195

Query: 235 KDFVAAARALGFGHGRIIFREILPNALPPVIVLASVTVATAILMESALSFMGLG-DPNVV 293
           +D+V AAR  G G  R++F  +LPN + P+IV A+++ ++AIL  +AL F+GLG  P   
Sbjct: 196 RDYVTAARLAGAGLPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTP 255

Query: 294 SWGSMIGTGRDLLRTAWYLSAVPGVAIVLTVLSLNLIGDGLNEALNPRL 342
            WG+M+ + RD +  AW++ ++PG+ I+L+VL++NL+GDGL +AL+P+L
Sbjct: 256 EWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKL 304