Pairwise Alignments

Query, 316 a.a., Oligopeptide transport ATP-binding protein OppF from Xanthobacter sp. DMC5

Subject, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

 Score =  292 bits (748), Expect = 6e-84
 Identities = 154/318 (48%), Positives = 207/318 (65%), Gaps = 9/318 (2%)

Query: 3   LLSVENLHAGYE------SGGRLLRAVDGVSFAVEPGETVGLVGESGCGKSSLAKVIMRL 56
           +LS   L   YE       G  L+RA++GVSF +E G+T+ +VGESGCGKS+LA+ +  +
Sbjct: 4   VLSARELTRHYEVSRGLFKGHALVRALNGVSFELEAGKTLAVVGESGCGKSTLARALTLI 63

Query: 57  VSPASGRVVFDGVDVGGLEGAPLKAYRRQAQIVFQDPFASLNPRQSIADILTAPLAVHGL 116
             P+SG +   G +V G   A  K  RR  Q+VFQ P+ASLNPRQ I D L  PL ++  
Sbjct: 64  EEPSSGSLQIAGTEVKGASKAERKQLRRDVQMVFQSPYASLNPRQKIGDQLAEPLLINTS 123

Query: 117 VPRGERLKAAGDALERVGLPREALSRYPHEFSGGQRQRLGIARALILFPRLVICDEPVSA 176
           + + ER       +E+VGL  E   RYPH FSGGQRQR+ +ARA++L P++++ DEP SA
Sbjct: 124 LSKAERRDKVQKMMEQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEPTSA 183

Query: 177 LDLSIQAQILNLLARLKAELGLSYLFISHDLSVVRYFADRVLVMYLGRIVETGSWQSIFA 236
           LD+SIQAQ+LNL   L+ E   +Y+FISH+L+VVR+ AD+VLVMYLGR  E G  + I+A
Sbjct: 184 LDVSIQAQVLNLFMDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGPKEDIYA 243

Query: 237 RPLHPYTRALIEAVPT--PGRRRHAAPLSGDLPSARNVPTGCRFHPRCPLATPLCTQSDP 294
           +PLHPYT+AL+ A P   P   +    + G+LP+  N P GC FH RCP AT  C +  P
Sbjct: 244 KPLHPYTQALLSATPAIHPDPLKPKIRIVGELPNPLNPPDGCAFHKRCPYATERCAKEVP 303

Query: 295 ALRPLGAGRAVACHHAPE 312
           ALR +   R VACH+A +
Sbjct: 304 ALRQVST-RQVACHYAEQ 320