Pairwise Alignments

Query, 291 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

Subject, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  149 bits (375), Expect = 8e-41
 Identities = 80/242 (33%), Positives = 133/242 (54%), Gaps = 4/242 (1%)

Query: 46  AAPVLLVVVWEVLAQV----GYVAPHVLPAPSKVVRTAYKLATSGTLLADLGTSLVRAAV 101
           A+ +  ++ W+V A V    G +    +P P  V+  A++L TS TLLA LG+SL R   
Sbjct: 13  ASLLACLLFWQVAANVKMDLGLLTFTYVPTPKAVLDAAWQLLTSSTLLAHLGSSLARVFA 72

Query: 102 GFVVGGSIAFALGILVGFSRLAEALVDRSVQMVRAIPFLALLPLVIVWFGVGEGQKIFLV 161
           G+     +  ALG+L+G S+ AE  +   ++++R IP +A +PL I+ F   E   +F+ 
Sbjct: 73  GYATAALVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVAWIPLAILMFPSSELSMVFIT 132

Query: 162 ALGVAFPIYINTTLGIRQVDPKLIELGRVQGLSTRQMISRIILPGALPSILTGVRYSLAT 221
             G  FPI +NT  G+  VDP+L+   R  G     ++  ++LPGALPSI+TG+   + T
Sbjct: 133 FTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPGALPSIVTGLAIGMGT 192

Query: 222 AWLALVVAETIGAQAGIGFLAMDAREFLRTDVVVLTIVIYALIGVVADSLARLLERRLLA 281
           +W  LV AE I  Q GIG+   ++        +V+ +++  ++G+ + +L + L      
Sbjct: 193 SWFCLVTAEMISGQFGIGYYTWESYTLQNYPDIVVGMLLIGVLGMGSSALVKRLGALATP 252

Query: 282 WH 283
           W+
Sbjct: 253 WY 254