Pairwise Alignments

Query, 420 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 397 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score = 81.3 bits (199), Expect = 5e-20
 Identities = 95/369 (25%), Positives = 159/369 (43%), Gaps = 29/369 (7%)

Query: 17  SLARRAVVAAGALMLAMPGI-----ALAQDQRTIKIGVLTDMSSLYADVTGKGSVVATQM 71
           ++ +R +++   L+LA  G+     A A D+  ++IG++   S  YAD  G+       +
Sbjct: 2   TMTKRTILST--LLLASFGVLGTTAAQAADE-PLRIGLIATYSGPYADY-GRQFDAGIAL 57

Query: 72  AVEDFNAAGKPLKVEVIAADHQNKA-DVAAGIARKWFDTEGVDMVVDVPNSAVALAVAAI 130
            +++         VE+I  D    A D A  IA++    + V ++  +  S  A AV AI
Sbjct: 58  YLKEHGGKVGGRTVEIIKKDTAGPAPDAAKRIAQELIVRDKVSVLTGLDFSPNAYAVGAI 117

Query: 131 AREKNKVMIASGPSSSDLTGKACSPNTVHWTYDTYALATGAATAVVESGGKNWFTLTADY 190
           A +     I    +SS +T    SP     ++    +    A  +++ G K+ +T+ ADY
Sbjct: 118 ATQAKIPTIVMNAASSAIT--TSSPYVARLSFTVQQVTDPMARYMLKEGIKDAYTVVADY 175

Query: 191 AFGHAMEQDVRNVVARTGGKVIGGVRAPLNTQDFSSFLLQAQASGAQVVGLINAGGDTIN 250
           A G   E   +      GGKV G VR P+N  DFS+++ + + +  Q V      G    
Sbjct: 176 ASGVDAETAFKKTFTAGGGKVSGEVRTPMNNPDFSAYVQRIKDAKPQAVFFFFPSGVMPP 235

Query: 251 S-IKQAVEFGIPQSGQRLVAT-------VLYVTDVHSLGLKVAQGLQFTESFYWDLNEGT 302
           + +K   E G+ Q+G +L AT        L  T   +LGL  +    F        +   
Sbjct: 236 AFLKVWKERGMEQAGIKLFATGEATDDSYLDATGDVALGLVTSHHYSFAHP-----SPKN 290

Query: 303 RAWTKRFAPRNDGRY-PSALHAGAYASTLHYLKAVSAVGAATDGVAVVDKMKALPTDDPL 361
           + + K FA  N  +  PS     AY +      A++     T G   +D +K L  + P 
Sbjct: 291 QKFVKDFAADNGAKLRPSYFAVTAYDAMAAIDLALAKTKGDTGGDKFMDALKGLSFESP- 349

Query: 362 FGKGSIRVD 370
             +G I +D
Sbjct: 350 --RGPIEID 356