Pairwise Alignments

Query, 408 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score = 70.9 bits (172), Expect = 6e-17
 Identities = 77/332 (23%), Positives = 128/332 (38%), Gaps = 8/332 (2%)

Query: 15  GLASLPAAALLGRPATAQAAEIPVGMVLPFSGATGPYGPDMKKAAEMVVRWVNDAGGILG 74
           G  +L  A  LG  +  QA ++ +G+  P +GA   +G    K A+     +N AGG+  
Sbjct: 9   GFLALAVATALGVSSYVQA-DVKIGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGV-N 66

Query: 75  GRPLKLFIEDSETNPTVGVTGTKKLLEVNKVELVGGFWGSPIALAAKPIILAADKVQMVS 134
           G  + L   D    P   V    +L++ +KV  V G + S   + A  +   A  + +  
Sbjct: 67  GEKIVLVKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGVIAITP 126

Query: 135 CSAN-AVTEGDTKGMVFRFQAKSTSWG-PAGAKVMKTIGAKTAVVLAQQNPFVVAMIEPF 192
            S N  VTE     M FR   +    G  AG  ++  +  K   VL  ++ +   + +  
Sbjct: 127 GSTNPQVTERGLSAM-FRMCGRDDQQGIVAGDYIVDVLKGKKVAVLHDKDTYGQGLADAT 185

Query: 193 KAEFAKLGGKVLDVVMYNPDQPSYRSEVEKAFGGDPDAVFCLSLLTDFVSIAKEVYRGGF 252
           KA+  K G K +        +  + + V K      D V+   L  +   + +++   G 
Sbjct: 186 KAQLEKRGVKPVLYEGLTRGEKDFSAVVTKIRSTGADVVYFGGLHPEAGPLVRQLREQGL 245

Query: 253 KSKIVALSIGADAEGKFLQAVGPEVANGIYHLQPAPPLDAPSYKRFVKEM---GAAPGTV 309
           K        G   +     A G +  +G+Y    A P   P  K  V+E    G  P   
Sbjct: 246 KDVKFMSDDGIVTDELVSTAGGAQYVDGVYMTFGADPRLLPDSKAVVEEFRKAGTEPEGY 305

Query: 310 FLFAGNAHDQMCVTALAMEHAKSSDAKVWAKS 341
            L+A  +   +       +  K  DA  W K+
Sbjct: 306 TLYAYASLQALAAAFNGAKSNKGEDAAKWLKA 337