Pairwise Alignments

Query, 306 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  137 bits (345), Expect = 4e-37
 Identities = 99/289 (34%), Positives = 150/289 (51%), Gaps = 21/289 (7%)

Query: 5   LVTVIILVAIAALVGLALNLQWGLAGLVNFGVAGFVALGAYTLAISAPHVGW--LAGLAL 62
           L T I++ A+AAL   A NL  G  GL++FG   F  +GAY  A+   H+ W   A L  
Sbjct: 37  LATEILIFAMAAL---ACNLLLGYTGLLSFGQGIFFGVGAYGAALLMIHLQWGMFAALLG 93

Query: 63  AAAVCAGLSMLLSLLTIRLEENYLAIVTIGFAEIVRILLLNLGDLTGGALGIADIPRP-- 120
           AA   A L++L+  L IR    Y  ++T+ F+++   L   L   TGG  G+ D+PRP  
Sbjct: 94  AAVFGAFLALLVGALAIRRTGIYFVMLTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRPNI 153

Query: 121 -FAGVTPAGWGDAV-ILAFALGLVVIVFAFSEALVRSPFGRALRAVRDDATAAAALGKPV 178
             AG       D      F   L +++FA +  ++RSPFG  L A+R++ T AAA+G   
Sbjct: 154 EIAGHVLVDLADPRHFYVFVAVLFLLIFAAALRVIRSPFGSTLLAIRENETRAAAIGYDT 213

Query: 179 LALRVRAFAIGGAIMGLAGALHAFFLTYIDPSQFTPIITAYAFMAVIAGGRGSNLGLVLG 238
              ++  F + GAI G+AGAL+A  L +   S    +++    +  I GG GS  G +LG
Sbjct: 214 RHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLG 273

Query: 239 AGSIMLILEATRFLKDVIPGIDGVQLSALRLGMIGVGIVLLLILRPEGL 287
           AG+I+L       L DV+      +L    L ++GV ++L+++    GL
Sbjct: 274 AGAIVL-------LGDVLS-----ELWPRWLMLLGVILILVVVFMRGGL 310