Pairwise Alignments

Query, 306 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 368 a.a., ABC-type branched-chain amino acid transport system, permease component from Enterobacter asburiae PDN3

 Score =  132 bits (333), Expect = 9e-36
 Identities = 103/324 (31%), Positives = 156/324 (48%), Gaps = 43/324 (13%)

Query: 3   SYLVTVIILVAIAALVGLALNLQWGLAGLVNFGVAGFVALGAYTLAISAP---------- 52
           +Y V VI    +  ++ L LN+  G  GL++ G   F A+GAY  A+ A           
Sbjct: 39  NYWVRVIDFALLYIMLALGLNIVVGYTGLLDMGFIAFYAVGAYLAALMASPHLLEVFPLL 98

Query: 53  --------HVGWLAGLALAAAVCAGLSMLLSLLTIRLEENYLAIVTIGFAEIVRILLLNL 104
                   H  +L  + LAA V A   +LL   T++L  +YLAIVT+GF EI+RIL+ NL
Sbjct: 99  GVWFPDGLHTSYLLIIPLAALVAAVCGILLGAPTLKLRGDYLAIVTLGFGEIIRILMRNL 158

Query: 105 G---DLTGGALGIADIPR------PFAGV-------TPAGWGDAVILAFALGLVVIVFAF 148
               ++T GA GI  +         F+GV        PA W    +  + L LV++   F
Sbjct: 159 DRPVNITNGAKGITGVDTLNLFGLKFSGVYHWFGFKVPALW----LWYYLLMLVIVAIIF 214

Query: 149 -SEALVRSPFGRALRAVRDDATAAAALGKPVLALRVRAFAIGGAIMGLAGALHAFFLTYI 207
               L  S  GRA  A+R+D   A A+G  V   ++ AFA+G +  G+AGAL   F  ++
Sbjct: 215 VCLRLQHSRIGRAWHAIREDEDVARAMGINVRNYKLLAFAMGASFGGVAGALFGAFQGFV 274

Query: 208 DPSQFTPIITAYAFMAVIAGGRGSNLGLVLGAGSIMLILEATRF----LKDVIPGIDGVQ 263
            P  FT   +      V+ GG G   G++LGA  +  + E  R     ++  + G   + 
Sbjct: 275 SPESFTLQESIAVLAMVVLGGMGHIPGVILGAILLTALPELLRSQAAPVQQALFGTVLID 334

Query: 264 LSALRLGMIGVGIVLLLILRPEGL 287
              LR    G+ +VL++++RP G+
Sbjct: 335 PEVLRQLFYGLALVLVMLVRPAGI 358