Pairwise Alignments

Query, 277 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

Subject, 596 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  175 bits (443), Expect = 2e-48
 Identities = 100/248 (40%), Positives = 145/248 (58%)

Query: 28  LQVKGLTRRYGGVAALDGVTLDLARGQVTGLIGPNGAGKTTLLNALTGLARPESGTVLLE 87
           L V+G+T+ YGGV     V+  L RG +  LIGPNGAGK+T++N LTG+  P++G +   
Sbjct: 335 LVVQGVTKSYGGVKPAQDVSFRLQRGHIHALIGPNGAGKSTMINMLTGVIEPDAGVIRFL 394

Query: 88  GENVTGLLAHVMAGKGVVRSFQIVRELASLTVFETLLAAPPAQSGETVAGALFGRRKWWA 147
           G+N+ G  AH +   G+ R+FQ +R  A L+V + ++    ++       +L        
Sbjct: 395 GQNIVGQPAHTICCLGMGRTFQNLRLFADLSVLDNVMLGRHSRMSNGFLSSLVAWPTAGK 454

Query: 148 QERANADLARALLERVGLVKLADQPSAMLSGGQKKLLEMARALLMKPRLILLDEPGAGVS 207
           QERA  + A  LL+ V L  LA  P+  L  G ++ +E+ARAL  +P+L+LLDEP AG++
Sbjct: 455 QERATRERALQLLDLVDLGHLAHWPAGSLPYGLQRRVELARALATEPQLLLLDEPAAGLN 514

Query: 208 PPLRLEIVRLVRELKAEGLSFGIVEHDMHLVEEVCDHVHVLAQGRALVSGTFAEATADPR 267
           P    E+  L+  +   G+S  +VEH M LV  + DHV VL  G  +  G  AE  A+PR
Sbjct: 515 PQETAELGELLLRIGKCGVSILMVEHHMDLVMSISDHVIVLDYGIKIAEGKPAEVQANPR 574

Query: 268 VVSAYLGV 275
           VV AYLGV
Sbjct: 575 VVEAYLGV 582