Pairwise Alignments

Query, 277 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

Subject, 296 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  162 bits (410), Expect = 8e-45
 Identities = 95/258 (36%), Positives = 147/258 (56%), Gaps = 11/258 (4%)

Query: 28  LQVKGLTRRYGGVAALDGVTLDLARGQVTGLIGPNGAGKTTLLNALTGLARPESGTVLLE 87
           L+V+ L+ ++GG+ A++  + +  RG++T LIGPNGAGKTT+ N +TG  +P  G + + 
Sbjct: 22  LKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGKTTVFNCITGFYKPTMGMITMR 81

Query: 88  GENVTGLLAH------VMAGKGVVRSFQIVRELASLTVFETLLAAPP----AQSGETVAG 137
            +N    L        +     V R+FQ +R  + LTV E LL A        SG T+ G
Sbjct: 82  QQNGEAHLLERLPDFEITKKAKVARTFQNIRLFSGLTVLENLLVAQHNALMKASGYTILG 141

Query: 138 ALFGRRKWWAQERANADLARALLERVGLVKLADQPSAMLSGGQKKLLEMARALLMKPRLI 197
            L G   +     ++ + A+  LE+  LV  AD P+  L  G ++ LE+ARA+   P L+
Sbjct: 142 -LLGLPAYKRAVASSIEKAKYWLEKADLVDRADDPAGDLPYGAQRRLEIARAMCTGPELL 200

Query: 198 LLDEPGAGVSPPLRLEIVRLVRELKAEGLSFGIVEHDMHLVEEVCDHVHVLAQGRALVSG 257
            LDEP AG++P   L +  L+R ++ EG S  ++EHDM +V ++ DHV VL  G+ +  G
Sbjct: 201 CLDEPAAGLNPKESLALNTLLRSIRDEGTSLLLIEHDMSVVMQISDHVVVLEYGQKISDG 260

Query: 258 TFAEATADPRVVSAYLGV 275
           +      DP+V++AYLGV
Sbjct: 261 SPDHVKNDPKVIAAYLGV 278