Pairwise Alignments

Query, 244 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 212 a.a., HTH-type transcriptional repressor NicS from Pseudomonas putida KT2440

 Score =  118 bits (295), Expect = 1e-31
 Identities = 64/199 (32%), Positives = 107/199 (53%)

Query: 6   RKRDSIGTQDKILAAAQVEFARKGYDGARVDAIIARAKISKNLLYHHFISKEELYVKVLE 65
           R + +  T+D IL AA   F+++G+ G R++ I   AK +  ++Y++F SKE+L++ VLE
Sbjct: 9   RAQQADRTRDNILKAAVKVFSKEGFTGGRIEQISTLAKSNDRMIYYYFGSKEKLFISVLE 68

Query: 66  RTYEAMRRRQEEIPLTGLAPLAAIRRLCEATFQTFIEEPEVIVMMNSENIHRGRHVAKSP 125
             Y +  + + ++ L    P  A+R L    +  ++  PE + ++ +EN+H+G H  KS 
Sbjct: 69  HIYASFNQAEAKLRLDLADPEQALRELVAFIWDYYVRHPEFVTILATENLHQGLHARKSQ 128

Query: 126 IIRQLYSRLAGTVDAILRDGEQQGVFRPGVDAIDLYISISALGYFYISNRFTLSMIFDRD 185
            +R L     G +  I+  G+ +G+FR  +     Y+ I++L YFY SNR TLS     D
Sbjct: 129 NLRALSGEAVGVLRPIIEAGQAKGLFRDDICITHAYLMIASLCYFYNSNRHTLSSFLAVD 188

Query: 186 LMRADYLEQHRTTIIDMTL 204
           L          T I D+ L
Sbjct: 189 LADKQAKADWLTFISDLAL 207