Pairwise Alignments

Query, 333 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 327 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

 Score = 77.4 bits (189), Expect = 5e-19
 Identities = 86/289 (29%), Positives = 129/289 (44%), Gaps = 32/289 (11%)

Query: 3   MTSIAARLVRAAAATALLAGPLAASAAAAEEKMTIRLDFSPWGVHAGMHLAKEKGWFKDA 62
           M S A  L  AAA   L   P     A AE+K T   ++     H G + A  +G +K  
Sbjct: 1   MRSFALSLAGAAAIAFLATAP-----AQAEDKFTYMTNWYAQAEHGGFYQAVAQGIYKKY 55

Query: 63  GLDVDIQDGRGSGNTLQLVNAGQAD--VGQIQVGLLPQARENGSTAKAFAGIDKRTDLAV 120
           GLDV I+ G    N  Q++ AGQAD  +G   + ++ Q RE G      A   ++ D  V
Sbjct: 56  GLDVTIKMGGPQVNITQMMAAGQADCIMGSSDIQMM-QVREGGVPVVNVAAFFQK-DPQV 113

Query: 121 LVDQESPVAKVADFKGKSLVVFAAS-----PWAPFIDYWLKQGGLDRTTVNVMFVDPSAV 175
           L+  +  V K  D KGK+L++ A +     PW        K G  D  T    F     V
Sbjct: 114 LIAHDD-VKKFEDLKGKTLLIGAQAQRGYWPWLK-----AKFGFTDEQTRPYTFNIQPFV 167

Query: 176 WGTYTAKRADGLMSTEPSAIPVAAANRPSKAILAEDVGITFPSYGLVAT--EKTIESRKD 233
               TA++  G +++EP AI  A     S  ++  D G  FP+Y    +  EKT++ R  
Sbjct: 168 ADKNTAQQ--GYLTSEPFAIQKAGVK--STVLMFSDHG--FPAYATTVSCMEKTLKDRNK 221

Query: 234 ALKKLVEVQQKAW-TYIRDGHVDEAADAIIKQRPNAKLDKKVLADQIKL 281
            +   V+   + W +Y+ D      A+A+IK+      D+++     KL
Sbjct: 222 QVAAFVKASAEGWKSYLAD---PAPANALIKKDNPNMTDEQLAYSVAKL 267